| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1511 |
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| Symbol | |
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| ID | 8252612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1793580 |
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| End bp | 1794839 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935165 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_003091787 |
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| Protein GI | 255531415 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.886557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAA ACGCAATTGT TTCTTTTAAA GGGATTAAAG ATATAAATGC TGAAATAGCC
TTAACCGGCT CAAAAAGCGA AAGCAACAGG GCACTAATCA TCAGTGCCCT GTCTGAAGGA
CTGGTTAAAG TTGACAATTT ATCGGATGCG GTTGACACCG TAACCCTGAA TAACATCCTT
AAGGCCATCG GAAAAGAAAA TGACCCGGAT ACTTTTTTTT CTGTAGATGT AGGACATGCG
GGCACAGCAA TGCGTTTTCT AACTGCCTAT TTATCCATTA CCAGGGGCAT GTTTTACCTG
ACCGGCTCAG GCAGAATGAA AGAGCGTCCG ATAAAATTAT TGGTTGAAGC TTTACAAAAA
CTAGGTGCAG GCATCAAATA TTCAGGACAA GATGGTTTTC CTCCGCTGGA AATCAATAAA
GATTTTAGGC AGGCCAGCCG GATAGTCAAA ATTCAGGGAA ACATCAGCAG CCAGTACTTA
TCCGCGCTTT TAATGATCGC CCCTTCTCTT CCATTGGGTT TATCTTTAGA AATTGAAGGT
GAATTAACTT CGCGCCCCTA CCTGGAAATG ACCTTAAGTA TGCTACAGGA TGCAGGAATT
GAACACCGAT GGGACAACAA TACCATTCAT ATTGATCAAC AGCCTTTTAA AGCTGCCGAA
TTGATTGTAG AACCTGACTG GAGTGCGGCC TCTTACTGGT ACAGCATTGC AGCCCTGGCC
GATCATGCGG AAATAACCTT ACCCAACTTA AAGCAAAAAA GTTTACAGGG TGACAGTAAG
ATCAGGGACA TTATGGTTGC ATTTGGCGTG CGTACTTCCA GTATTCCTAA TGGCATTGCC
CTAAAATCCG GTACTTCTGT AGCAATAACC GAAGTATTGA ACCTGAAGGA CTGCCCCGAC
CTAGCCCAGA CCATTATTGT ATGCGCTGCC GCAAAAGGAT TGAACCTTTC GTTTACAGGA
CTGGAAACAC TTAAGATAAA AGAAACCAAC AGGATATTGG CGCTGCAACA GGAACTGATC
AAAATAGGAG TAGTTTTAAA GGAAGAGAAT GAAGTATATA CTTTAAATTG CGATCAGCTA
AGTTTTCCTG AAAAAGTAAC TTTTGCTACT TATGACGATC ACCGTATGGC TATGGCTTTT
GCACCCTTAA GTTTCTTTAT CAAAGAAATA GAGATGGAAG ATTATCAGGT TGTGGAAAAG
TCATATCCTG ATTACTGGAA AGACCTGGAG AAAGCGGGAT TTGAAATCCA GGAAATTTAA
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| Protein sequence | MSKNAIVSFK GIKDINAEIA LTGSKSESNR ALIISALSEG LVKVDNLSDA VDTVTLNNIL
KAIGKENDPD TFFSVDVGHA GTAMRFLTAY LSITRGMFYL TGSGRMKERP IKLLVEALQK
LGAGIKYSGQ DGFPPLEINK DFRQASRIVK IQGNISSQYL SALLMIAPSL PLGLSLEIEG
ELTSRPYLEM TLSMLQDAGI EHRWDNNTIH IDQQPFKAAE LIVEPDWSAA SYWYSIAALA
DHAEITLPNL KQKSLQGDSK IRDIMVAFGV RTSSIPNGIA LKSGTSVAIT EVLNLKDCPD
LAQTIIVCAA AKGLNLSFTG LETLKIKETN RILALQQELI KIGVVLKEEN EVYTLNCDQL
SFPEKVTFAT YDDHRMAMAF APLSFFIKEI EMEDYQVVEK SYPDYWKDLE KAGFEIQEI
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