| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1509 |
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| Symbol | |
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| ID | 8252610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1790004 |
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| End bp | 1792427 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644935163 |
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| Product | Transketolase domain protein |
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| Protein accession | YP_003091785 |
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| Protein GI | 255531413 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.277218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.362393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCAA ATAGTAAACT TACCACAAAC CCTATCGACG CTTCGGAGTT AAGTTTTGAT
GACTTCAAAA CTATTGTTAT AAATGATTAT AAAATAGCTG TAGAGAGTAG ACAGGCTAGT
TTATTGGGCC GAAAGGAAGT GTTGACAGGT AAGGCAAAGT TTGGAATTTT TGGCGATGGT
AAAGAGCTTC CGCAAATTGC AATGGCGAAG GCTTTTAAGA ATGGCGACTG GCGCTCAGGT
TATTACAGGG ACCAGACTTT TGCTTTTGCA GCGGGCATCT GTACCATTAA AGAATTCTTT
GCCCAGTTAT ATGCCAATCC CAGTGTGGAG GCAGATCCTG CATCGGCAGG CCGGCAAATG
AACTGCCATT TTGCAACCCG TTCTTTAAAT GAAGACGGTA GCTGGAAAGA TTTAACGGAT
ATAAAAAATT CCTCCTCGGA TATTGCACCA ACAGGTGGAC AAATGGCCAG GTTAGTTGGT
CTGGCATATG CCTCGAAATT ATACAGGCAA AATCCTGAAC TGGAATATTT AAAGAATTTT
TCGGTCAATG GCAATGAGGT GGCTTTTGGT ACCATTGGCA ATGCTTCTAC ATCCGAAGGT
GTATTTTTTG AAGCCATTAA TGCAGCCGGT GTTTTACAGA TACCCATGGC GATGTCTGTT
TGGGATGATG CTTATGGCAT TTCAGTACCT GCAAAATACC AGACTACAAA AGAAGATATC
TCTGAAATTT TAAAGGGCTT TCAGCGTGAT GAAAAAGTTG AAGGCTATGA AATATATAAA
GTAAGGGGCT GGGATTATCC GGCATTGTGC GAAACCTATC AGCGTGCCAT TGATGTTTGC
AGGAGCGAAC ACGTGCCGGT GCTGATCCAT GTTACCGAAG TTACCCAGCC GCAGGGCCAC
TCTACTTCAG GTTCTCATGA ACGTTACAAA GATAAAGACC GTTTAGAATG GGAAAAAGAG
TACGATTGTA TCCTTCAGAT GCGCAAATGG ATGCTGGAAT CGGCAATTAT CTCTGAAGAG
GAAATCCTTG AACTGGAAAA TACCGCCAAG AAATTTGTTC GTGAAACCCA AAAAGAAGCC
TGGAATGAAT TTTTAGCTTC TATAAAAGCA GAAAAAGACC TGGTTGTTAC TGCCATAAAC
AATGTTGCCA ATGGTGATCC TGCATTGATC AAAATTGCCA GTGTTCTGGT CAGTACACCT
GATGCGCAAA GAAGGGAGGT TATTTCTTCG GCAAGAAAGG CTTTACGGTT ATCCATAAGC
CAGCCTTCTG CTGCCAGAAA TGAATTGCTG GACTGGTATA ATGATCAGGC CGGACTGAAT
GAAGACCGTT ACCATTCAAA ATTATTTACA GATGGTGCTG AAAGCCCTAT GCTGGTCAAT
GAATTGAAAC CAGCATACAA CGAACTCAGC AAAATGGTTG ATGGCCGTGA GCTGCTGAAT
GCTTGTTTTG ACGCCAATTT TGCACGTGAC CAGCGTTTGG TTGCTTTTGG AGAAGATTTA
GGCGCAATTG GGGATGTGAA CCAGGGCTTT GCCGGCTTAC AGGCAAAATA TGGAGAACTG
AGGATTACCG ATACCGGAAT CAGGGAAATG ACCATAATAG GACAGGGCAT AGGCCTGGCA
TTGCGTGGCT TACGCCCGAT TGCCGAAATC CAGTACCTGG ATTACCTGCT ATATGCTTTA
AATATTCTGA GTGATGACCT CGCAAGTTTG TCGTACCGTA CCAAAGCCGG ACAAAAAGCA
CCGGTGATCA TTAGAACGCG TGGGCACCGG CTGGAGGGTG TATGGCATTC AGGTTCTCCA
ATAGGGATGA TCCTGGGTTC TTTAAGGGGG CTGCATATCT GTGTGCCCCG CAACATGACC
CAGGCAGCGG GAATGTATAA TACCCTTTTC AGATCTGATG AACCTGCACT GCTCATAGAA
TGCCTGAACG GTTACCGCCT GAAAGAAAAG TTACCTGAAA ATGTTGGTGA ATATACCGTG
CCTTTGGGTA AGGCCGAAGT GATCAGGGAA GGCAGTGATT TAACTGTTGT TTCTTATGGT
TCTACTTTAA GAATTGTGGA GGAAGCGGCA GAAGAACTTG CCCAATTGGG TATCTCTATT
GAAATTGTTG ATCCCCAGAC CTTATTGCCT TTTGATACCG ATCAGCTCTG TGCACAGTCT
TTGGCAAGAA CAAATAAGTT ACTGGTTGTG GATGAGGATG TACCTGGAGG CGGAACTGCA
TTTTTACTGC AACAGATACT GGAAGTGCAG AATGGTTATT ATCACCTGGA TGGACAACCG
CGAACATTGA GTGCCAAAGC GCATCGCCCT CCTTATGGTT CTGACGGGGA TTATTTCAGT
AAACCTTCTG TTGATGATGT AATAGAGGTT GTTTATGCTA TGATGAACGA GAGCAACCCG
GGTAAATATC CGGCTATATA CTAG
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| Protein sequence | MMPNSKLTTN PIDASELSFD DFKTIVINDY KIAVESRQAS LLGRKEVLTG KAKFGIFGDG
KELPQIAMAK AFKNGDWRSG YYRDQTFAFA AGICTIKEFF AQLYANPSVE ADPASAGRQM
NCHFATRSLN EDGSWKDLTD IKNSSSDIAP TGGQMARLVG LAYASKLYRQ NPELEYLKNF
SVNGNEVAFG TIGNASTSEG VFFEAINAAG VLQIPMAMSV WDDAYGISVP AKYQTTKEDI
SEILKGFQRD EKVEGYEIYK VRGWDYPALC ETYQRAIDVC RSEHVPVLIH VTEVTQPQGH
STSGSHERYK DKDRLEWEKE YDCILQMRKW MLESAIISEE EILELENTAK KFVRETQKEA
WNEFLASIKA EKDLVVTAIN NVANGDPALI KIASVLVSTP DAQRREVISS ARKALRLSIS
QPSAARNELL DWYNDQAGLN EDRYHSKLFT DGAESPMLVN ELKPAYNELS KMVDGRELLN
ACFDANFARD QRLVAFGEDL GAIGDVNQGF AGLQAKYGEL RITDTGIREM TIIGQGIGLA
LRGLRPIAEI QYLDYLLYAL NILSDDLASL SYRTKAGQKA PVIIRTRGHR LEGVWHSGSP
IGMILGSLRG LHICVPRNMT QAAGMYNTLF RSDEPALLIE CLNGYRLKEK LPENVGEYTV
PLGKAEVIRE GSDLTVVSYG STLRIVEEAA EELAQLGISI EIVDPQTLLP FDTDQLCAQS
LARTNKLLVV DEDVPGGGTA FLLQQILEVQ NGYYHLDGQP RTLSAKAHRP PYGSDGDYFS
KPSVDDVIEV VYAMMNESNP GKYPAIY
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