Gene Phep_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1493 
Symbol 
ID8252594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1771469 
End bp1772014 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content32% 
IMG OID644935147 
Producthypothetical protein 
Protein accessionYP_003091769 
Protein GI255531397 
COG category[R] General function prediction only 
COG ID[COG3911] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.33943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATAA AAAACAATTT TCACATCATA ACCGGTGGCC CAGGAGTTGG AAAAACAACT 
TTAATAAATG AGTTGCAACA GAAGCAAATG AACTGCATTC CTGAAGTAGC CCGAGAAATT
ATCAAAGATC AATTAAAAAA TAATGGCCAG GCCCTACCTT GGAAAAATGC AAAAGAATAT
TCTAAATTAA TGCTTTCGCA TTCTGTTCGG GATTATGTCA AACTACTGGA TGCCAATGAT
CTTTATTTTT TTGACCGTGG TATTCCAGAC ACCTATGCTT ATGAATGCCT GATGAACTTT
GATTATGATG AGAATTTAAA TTTCATTGTA AATAAATACA GATACAATAA AATAGTTTTT
ATACTCCCTC CCTGGGAAGA AATATACAAA ATGGATAACG AGCGAAAACA AGATTTTCAG
GTAGCTAAAG AAACCTATAA TGTAATAAAA GATACTTATG AATGTTTAAA TTATGATCTA
ATTGAAGTAC CATGCTTGGC TCCTGCAGAA AGGGTTGATT TTATTAAAAA AACACTAAAT
AAATAA
 
Protein sequence
MIIKNNFHII TGGPGVGKTT LINELQQKQM NCIPEVAREI IKDQLKNNGQ ALPWKNAKEY 
SKLMLSHSVR DYVKLLDAND LYFFDRGIPD TYAYECLMNF DYDENLNFIV NKYRYNKIVF
ILPPWEEIYK MDNERKQDFQ VAKETYNVIK DTYECLNYDL IEVPCLAPAE RVDFIKKTLN
K