Gene Phep_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1488 
Symbol 
ID8252589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1768004 
End bp1768699 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content30% 
IMG OID644935142 
Productfatty acid hydroxylase 
Protein accessionYP_003091764 
Protein GI255531392 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.568753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAC TTTTTGAAAG CCTATCCTTG CTGGAATGGA TTATTTTCAG TTTGATATCC 
AATGTATTTT TGTATTTGCT TTCGATTGGA TTTTACCTTT TTATTGATAA AACCTGCTCG
AAAAATAAGA TTCAAATAAC TGATCATCCT TTTCTAAAAT CTGATTTGTA TGTAAGTTTT
CTAACCTTAT TCCTTAATAT CGTTGTGATG TTGATTGGTG TTTATTTGTG GAAATCGGGA
TGGATTACAT TAAACGAGTC TAAAACTATC CTGACGCTTC TTATTGAAAT TATAGCGATT
ACACTGGTAA TGGACCTGTT CATGTATATT TTTCATTGCC TGGTACATCA TCCGTTTATC
TATAAAATTT TACACCGCAA ACATCACGAA CATAAGAGTA CTAATTTCCT GAGTCTTTTT
GTGTTGCATC CCTTTGAAAC CTTAGGTTTC GGATTGATGA TGATCTCTGT TTTTATGTTG
TATGATTTTT CTATTTTTTC CATTACAATT TATCTGTTTA TCAATTTAAT TTGGGGAACT
ATTGGTCATC TAAACCGGGA ATTCTTTCCA AAATGGATGG AACAATTATT TTTAGGAACT
ACAAAATTTC ATAACCAACA TCATTTAAAC GAACAAAGAA ACTTTGGTTT TTATACTTCC
ATTTGGGATC GAATATTTGG AACATATAAA GCTTAA
 
Protein sequence
MKLLFESLSL LEWIIFSLIS NVFLYLLSIG FYLFIDKTCS KNKIQITDHP FLKSDLYVSF 
LTLFLNIVVM LIGVYLWKSG WITLNESKTI LTLLIEIIAI TLVMDLFMYI FHCLVHHPFI
YKILHRKHHE HKSTNFLSLF VLHPFETLGF GLMMISVFML YDFSIFSITI YLFINLIWGT
IGHLNREFFP KWMEQLFLGT TKFHNQHHLN EQRNFGFYTS IWDRIFGTYK A