Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1488 |
Symbol | |
ID | 8252589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1768004 |
End bp | 1768699 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 644935142 |
Product | fatty acid hydroxylase |
Protein accession | YP_003091764 |
Protein GI | 255531392 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.568753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAC TTTTTGAAAG CCTATCCTTG CTGGAATGGA TTATTTTCAG TTTGATATCC AATGTATTTT TGTATTTGCT TTCGATTGGA TTTTACCTTT TTATTGATAA AACCTGCTCG AAAAATAAGA TTCAAATAAC TGATCATCCT TTTCTAAAAT CTGATTTGTA TGTAAGTTTT CTAACCTTAT TCCTTAATAT CGTTGTGATG TTGATTGGTG TTTATTTGTG GAAATCGGGA TGGATTACAT TAAACGAGTC TAAAACTATC CTGACGCTTC TTATTGAAAT TATAGCGATT ACACTGGTAA TGGACCTGTT CATGTATATT TTTCATTGCC TGGTACATCA TCCGTTTATC TATAAAATTT TACACCGCAA ACATCACGAA CATAAGAGTA CTAATTTCCT GAGTCTTTTT GTGTTGCATC CCTTTGAAAC CTTAGGTTTC GGATTGATGA TGATCTCTGT TTTTATGTTG TATGATTTTT CTATTTTTTC CATTACAATT TATCTGTTTA TCAATTTAAT TTGGGGAACT ATTGGTCATC TAAACCGGGA ATTCTTTCCA AAATGGATGG AACAATTATT TTTAGGAACT ACAAAATTTC ATAACCAACA TCATTTAAAC GAACAAAGAA ACTTTGGTTT TTATACTTCC ATTTGGGATC GAATATTTGG AACATATAAA GCTTAA
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Protein sequence | MKLLFESLSL LEWIIFSLIS NVFLYLLSIG FYLFIDKTCS KNKIQITDHP FLKSDLYVSF LTLFLNIVVM LIGVYLWKSG WITLNESKTI LTLLIEIIAI TLVMDLFMYI FHCLVHHPFI YKILHRKHHE HKSTNFLSLF VLHPFETLGF GLMMISVFML YDFSIFSITI YLFINLIWGT IGHLNREFFP KWMEQLFLGT TKFHNQHHLN EQRNFGFYTS IWDRIFGTYK A
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