| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1473 |
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| Symbol | |
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| ID | 8252574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1746145 |
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| End bp | 1747092 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935127 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003091749 |
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| Protein GI | 255531377 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.844163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.308396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA GTGAATTGAA TTTGATTTTA TGTACCGAAA TGTCAGAAGT CCCCAAGGCA
GAATTTGCTG ACTATTTGGG TAATACAGGT TACATGAGCT TCAGCGAAGT AAAAATTAAT
GGTGCAGATA TATTCTCTGG CAACAGTAAG CTGGTACAGG AAATAACCCT GCGCGAACAA
ACCGATACAC CTGCCTTAAA CATGTATTTT TCTATTCAGG GCATCAGCTC GGCATGGGAA
GCAAACAGCA AGGATAAATA TGTATTGAAA GACAATCAGC ATGCCGCTAC CTTTGCCCCT
GGTTTTGACG GATACTATGC TTTAAGCAGT CCAGAAGTCC GCAACTTTGG CATAGCCCTT
TACGAACCTT TTTTCAGCAG GCTCTATGCT ACAGATCTGG AATGCCTGAA ACGTTTCTGG
GATAAGGTAA GCGAAGGAAA AATAGCAGAC ATTTCCGATC ATGCCCTGCC GATTACCCCA
AAACAGCAAT CGGTCATAAA CGATATGCAC CACTGTGTGT ATACCGGAAA CATGAAACAG
CTGTTTTATG AATCCAAGAT CACAGAGCTC TTTTTACTAC AGGCCGAACA GGCCGATGCC
CTGAACGGCG CCAAGCCCGT TCAAATAGAA CGCCGCCATA TTGACAAGCT GCATGCTGCA
AGACAATATA TCCAGCAATG CATGTTCGAC CCGCTTACCT TAAGCGGAAT AGCACGTGAG
GCAGGTATTA ATGAATTTAT GCTGAAAAAA GGCTTTAAAG AACTCTTTGG CCTGACCGTT
TTTGGTTATT TAAATGAACT GAAAATGAAC TATGCGCGGC AAATGCTGCT GGAATCGCAG
TGCACAGTAT ACGAAGCCGC CTATACCATG GGGTATAACG AACCCTATAA TTTTTCAAAA
GCCTTTAAAA AACACTTTGG CTACCTGCCC GGTGAATTAA AAAAATAA
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| Protein sequence | MIDSELNLIL CTEMSEVPKA EFADYLGNTG YMSFSEVKIN GADIFSGNSK LVQEITLREQ
TDTPALNMYF SIQGISSAWE ANSKDKYVLK DNQHAATFAP GFDGYYALSS PEVRNFGIAL
YEPFFSRLYA TDLECLKRFW DKVSEGKIAD ISDHALPITP KQQSVINDMH HCVYTGNMKQ
LFYESKITEL FLLQAEQADA LNGAKPVQIE RRHIDKLHAA RQYIQQCMFD PLTLSGIARE
AGINEFMLKK GFKELFGLTV FGYLNELKMN YARQMLLESQ CTVYEAAYTM GYNEPYNFSK
AFKKHFGYLP GELKK
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