Gene Phep_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1461 
Symbol 
ID8252562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1736013 
End bp1737113 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content47% 
IMG OID644935115 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003091737 
Protein GI255531365 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.548376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTG CAAATCTATT CAGGCCTTTT AGTCTGAAAT CATTGAACAT AAAAAACAGG 
ATTGTAATGG CACCAATGAC ACGTTCTTTT TCACCTGCTG GTGTGCCAAC AGCAGATGTT
GCTGCCTATT ATTCCAGAAG GGCGGCAGGC GAAGTGGGCT TAATCCTGTC GGAAGGAACG
GTTATAGACC GTGTTTCTTC GTCAAATGAC CCTAATGTCC CTCATTTTTA TGGTACTAAA
GCATTGGCGG GATGGAAGGA AGTGATCCAT AGCGTGCACC ATGCCGGCGG AAGTATGGGA
CCCCAGATCT GGCACATGGG GATTATGGAT AACCATCATT CGGGATGGTT ACCTCCCGCA
CCTTTTGAAG GGCCATCTGA TTTGAACAGA CCTGGTTTTT CGAATGGTGT GGCGATGACA
CAGGACGATA TTGATGCGGC TGTTAAAGCT TATGGAAAAG CTGCAGCTGA AGCAAAGAGA
CTGGGTTTTG ATTGCGTGGA GGTACATGGT GCACATGGCT ATCTGATAGA CCAGTTTTTT
TGGGAAGGCA CCAATAACCG GAGCGATAAC TACGGGGGCC AAACCCTGGC CGAGCGTACC
AGGTTTGGTG TAGAAGTAAT TAAAGAAGTG AGAAGACAGG TAGGCGAGGA TTTTACCATT
ATTTTGCGAT TATCCCAATG GAAGCCAGCT GATTATACTT TTAAGCTGGC TAAAACGCCT
AAGGAAATGG AGTCCTGGTT GGAACCCCTT GTTGAGGCTG GTGTAGACAT CTTTCATTGT
TCGCAGCGAC GCTTCTGGGA ACCTGAGTTT GAAGGGTCGG ATCTGAACTT TGCAGGCTGG
GCCAAGAAAA TAACTGGAAA AGCAACCATC ACTGTTGGTT CTGTGGGTTT GTCGGGCGAG
TTTCTGGCAG CCTTTAAAGG AGAAAGTTCT GAGCCAAGTT CATTGGAAGA GCTGATGAGA
AGAATGGATA GGGGCGATTT TGACCTGGTT GCTGTTGGCC GGCCATTGCT GGCAGATCCA
AACTGGGTAC AGAAAATAAG GGACGAACGC CTTAGCGAAT TAAAAGGCTT TTCAAGGGAA
GCGCTGATGC AACTGTTATA A
 
Protein sequence
MSTANLFRPF SLKSLNIKNR IVMAPMTRSF SPAGVPTADV AAYYSRRAAG EVGLILSEGT 
VIDRVSSSND PNVPHFYGTK ALAGWKEVIH SVHHAGGSMG PQIWHMGIMD NHHSGWLPPA
PFEGPSDLNR PGFSNGVAMT QDDIDAAVKA YGKAAAEAKR LGFDCVEVHG AHGYLIDQFF
WEGTNNRSDN YGGQTLAERT RFGVEVIKEV RRQVGEDFTI ILRLSQWKPA DYTFKLAKTP
KEMESWLEPL VEAGVDIFHC SQRRFWEPEF EGSDLNFAGW AKKITGKATI TVGSVGLSGE
FLAAFKGESS EPSSLEELMR RMDRGDFDLV AVGRPLLADP NWVQKIRDER LSELKGFSRE
ALMQLL