Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1453 |
Symbol | |
ID | 8252554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1724250 |
End bp | 1724855 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644935107 |
Product | hypothetical protein |
Protein accession | YP_003091729 |
Protein GI | 255531357 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAT TATTATTATC ATTAGTTGCA GTTGCAGGTT TAGCTTTTAC CACTCAGGCT CAAACAGAAA AAGGAAAAAT AATTGTTGGT GGTAGCTTAG GTTTAAACTC TACAAAAGAA GAAGGGGCTT CGAAATCAGA TTTCAGGTTT AATGTAGTAC CTTCTGTTGG ATATTTTGTA AGCGATAATT TTGCTATAGG TACCGGAGTT GGTTACAATT ATGACAAAAA GGTAAGTCAG GAATATTTAA ACCAATCTTT TGAGGTTGCA CCTTTTGGCC GTTATTATGT TGGATTGTCT GATCAGTTCA AATTCTTTGG TCAGTTATCG GTACCGATGG CTTTCGGAAA CGTTAAAGAT GTAGACGGCG TTACCGGCGA TGTGGGCGAC AAAAAAGGTA CAACAACTTC AATAGGTGTA CAACTTGCCC CTGGATTTGC TTTCTATCCT ACTAAAAGAG TTGGCATAGA GGTTTCTGTA GATGGCTTGG GATATAACAA TTACACTGTT AAAGATGCTG CTACAGGCAA TAAAGCAAAA ACAGATACTT TTGGTTTAGA TGCAAGCACC ATTACCCCAA AACTGGGTGT GATGTTCCAC TTCTAA
|
Protein sequence | MKKLLLSLVA VAGLAFTTQA QTEKGKIIVG GSLGLNSTKE EGASKSDFRF NVVPSVGYFV SDNFAIGTGV GYNYDKKVSQ EYLNQSFEVA PFGRYYVGLS DQFKFFGQLS VPMAFGNVKD VDGVTGDVGD KKGTTTSIGV QLAPGFAFYP TKRVGIEVSV DGLGYNNYTV KDAATGNKAK TDTFGLDAST ITPKLGVMFH F
|
| |