| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1371 |
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| Symbol | |
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| ID | 8252471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1629736 |
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| End bp | 1632675 |
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| Gene Length | 2940 bp |
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| Protein Length | 979 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935024 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003091647 |
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| Protein GI | 255531275 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.940819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTAA ATGTCCACTC TTCCTATAGC CTGCGTTATG GCACCATGTC TGTAGAACAG
CTTGTAAAAG AGGCAGTTTC TTTGGGAATT GAGCAAATGG CCATTACAGA TATCAATAAC
TCTACCGGGG TAATGGAATT TATGCGGGAA TGCAGGGCGC ATGGTGTCAG GCCGATCGGT
GGAATAGAAT TCAGGAAGCA GAATAAATTG TTATATATCG GTATAGCCAG GAACAAGGAA
GGAATGAAGG AACTGAACGA CTTTTTGACC TTTCATAACT TCAGCAAAAA GGAATTGCCC
GCCAGGGCAG ATGCGTTTAA AAATGCCTGT GTGATCTATC CTTATCAAAG TGGCATAGCA
GTCGGGACAG ATGATTTTAT AGGCATCCGG CCAGGGCAGT TGAACCTGCT TTACGGAAGG
GACCTGAGCC AGCTGAAGGA TAAGCTGGTG GTTTGGCAGC CGGTAACGGT TTACAACCGT
TTACACTACC GCCTGCATGA ATACCTGCGG GCAATAGACC TGAATACACT GCTTACTAAG
GTTGATGAAG GTAATAAATG CAGGCCGGAC GAGCATTTTT TGCCCCCCGG TGAGCTGAAG
CATTTGTATG CCGCTTATCC TTTTATTCTT GAAAATACAG AAAAATTAAT GGCGGGTTGT
ACCCTTAATT ATGTAAACAA AGAAAGAAGG AACAAAAAGA CTTACAAAGG GAGCAAGGCA
GAAGACAAAC TGCTGCTGGA ACAGCTGGCT TGGGCCGGAC TTGAGCAGCG TTATAAAGGT
GAAAATCATG AGGCCGCAGA ACGGCTGAAA AAAGAACTGG AAGTTATCGA AGAGCTTGAT
TTCTTTGCTT ATTTTCTGAT CACCTGGGAC ATCATCCGCT ATGGCAAAAG TAAGGGCTAT
TATCATGTAG GCCGGGGATC AGGGGCAAAC AGTATTGTGG CTTACTGCCT GTTCATCACC
GATGTAGACC CGATAGAGCT GGATCTTTAT TTTGAGCGGT TTCTGAATAA GAACCGCAGT
TCGCCCCCGG ATTTTGATAT AGATTATTCA TGGGATGAAA GGGAAGATAT ACAACAGTAT
ATTTTTAATA CTTATGGTGA AAAGCATACG GCCATGCTGG GTACGATGAG TTCATTTAAA
GACCGCTCGG TCTTCCGGGA GATCGGGAAG GTAATGGGAT TGCCCAAAGC AGAGATCGAT
GATTTCCTAG ATCCTGTAAA ACAGGAAGAA CACAAAAAAA ATCCTGTTTA TAAAAAGATC
ATGGCTGCGC ATGGCATGAT GGAGAAAATG CCTAACCAAC GTTCTATACA TGCCGGGGGG
ATATTGATTT CGGAAGATCC AATCACTTAT TATACCGCGC TGGACCTGCC CCCAAAAGAT
TTTGCCACGG TACAATGGGA CATGTACGAA GCAGAAGCTA TAGGGCTGGA TAAATTTGAT
ATTCTGAGTC AGCGGGGCAT TGGCCATATT AAAGAGGCCG TGCAGCTCAT CAGGCAAAAT
ACGGGTGATG TGGTCGATAT CCATGATACC AGGAGCTTGC TGAAAGATCC CAGACTTAAT
GGTTTGCTGA AAGAGGGTAG CAGCATTGGC TGTTTTTATA TCGAATCGCC CGCCATGCGG
CAATTGCTGG TCAAACTGGC TTGTGAAGAC TACCTTACAC TGGTGGCAGC CAGTTCCATT
ATCAGGCCCG GTGTAGCGCA ATCTGGTATG ATGGCGACCT ATATTTACAA CTATCACCAT
CCTGAAGAAG TGAAATACCT GCACCCGATT ATGGAAGAGC ACCTGAAAGA TACCTATGGG
GTAATGGTTT ACCAGGAAGA TGTGATCAAA ATCTGTTACC ATTATGGAGG ACTTGATCTG
GCAGATGCTG ATATCCTGAG AAGAGGAATG AGTGGAAAGT ACCGTTCAAA AAAGGAATTT
GACCGCCTGA TAGAGAGTTT TTTTATCCAT GCAAAGAAAG AGGGCAGGGA TGAGGAGGTA
ACCAAAGAAA TCTGGAGGCA GGTGGCTTCG TTTGCCGGAT ACAGTTTTTC TAAGGCCCAT
TCCGCAAGTT ATGCGGTAGA GAGCTATCAG AGCTTATTTT TGAAGACTTA TTACCCTAAA
GAGTTTATGG TTGCTGTACT CAATAACTAT GGAGGCTTTT ACCAGCGTTG GGTATATGTG
CACGAGTTAC GTAAAGTAGG GGCCGTAGTA CACCTGCCCT GTGTAAACCA CAGTGAAGAT
GTTGTAAGCA TCAATGGGTC AGATGCCTAC CTGGGTCTGA TTGGTATTCA GGGGCTGGAG
AGCCGGCATA TGACCCTGAT CCCCAAAGAA CGGAGGGCCA ATGGTCTGTA TAAAGGATTG
GAAGATTTTG TACGGCGTAC AGGAATCACA CTGGAACAGG CCATCCTGCT CATCAGGATC
GGTGCATTGC GCTTTACAGG TTCCAGTAAA AAAGCCTTGC TCTGGGAGGT GTACAGTTAC
CTGGGCAATA AGCAACCGGA AGTACCCTCA CAGGAACTTT TCCGGATGGA AAGCAAAGCC
TGTGTGCTTC CGCCCCTGGA TTCAGACAAA CTGGAGGATG CATATAATGA ACTCGAACTG
CTGGGCTATC CGGTAAGTAT GGGAATGTTT GACATGCTGA AAACAGACTA CAGAGGTGAT
GTGAAAGCTT CAGGTTTAAG AGCATATATT GGTCAAACTA TAAAAATGGT AGGTTTGTAC
GTCTGCGAAA AAACAGTGCA CACCAAAAAC AACAAAAAAA TGTGGTTCGG TACCTTTTTA
GACGCCGAGG GGAATTTCTT TGATACCACA CATTTCTCTA CCCATACACC TGTATACCCT
TTCAGGGGAA AGGGCTGTTA CCTGATATTG GGCAAAGTGG CGACAGATTT TGGCTTTCCA
AGTATTGAAG TGTTCCGCTT TGCCAAATTG CCCCTGGTAG ATAACCCGGT AATGGCTTAA
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| Protein sequence | MFLNVHSSYS LRYGTMSVEQ LVKEAVSLGI EQMAITDINN STGVMEFMRE CRAHGVRPIG
GIEFRKQNKL LYIGIARNKE GMKELNDFLT FHNFSKKELP ARADAFKNAC VIYPYQSGIA
VGTDDFIGIR PGQLNLLYGR DLSQLKDKLV VWQPVTVYNR LHYRLHEYLR AIDLNTLLTK
VDEGNKCRPD EHFLPPGELK HLYAAYPFIL ENTEKLMAGC TLNYVNKERR NKKTYKGSKA
EDKLLLEQLA WAGLEQRYKG ENHEAAERLK KELEVIEELD FFAYFLITWD IIRYGKSKGY
YHVGRGSGAN SIVAYCLFIT DVDPIELDLY FERFLNKNRS SPPDFDIDYS WDEREDIQQY
IFNTYGEKHT AMLGTMSSFK DRSVFREIGK VMGLPKAEID DFLDPVKQEE HKKNPVYKKI
MAAHGMMEKM PNQRSIHAGG ILISEDPITY YTALDLPPKD FATVQWDMYE AEAIGLDKFD
ILSQRGIGHI KEAVQLIRQN TGDVVDIHDT RSLLKDPRLN GLLKEGSSIG CFYIESPAMR
QLLVKLACED YLTLVAASSI IRPGVAQSGM MATYIYNYHH PEEVKYLHPI MEEHLKDTYG
VMVYQEDVIK ICYHYGGLDL ADADILRRGM SGKYRSKKEF DRLIESFFIH AKKEGRDEEV
TKEIWRQVAS FAGYSFSKAH SASYAVESYQ SLFLKTYYPK EFMVAVLNNY GGFYQRWVYV
HELRKVGAVV HLPCVNHSED VVSINGSDAY LGLIGIQGLE SRHMTLIPKE RRANGLYKGL
EDFVRRTGIT LEQAILLIRI GALRFTGSSK KALLWEVYSY LGNKQPEVPS QELFRMESKA
CVLPPLDSDK LEDAYNELEL LGYPVSMGMF DMLKTDYRGD VKASGLRAYI GQTIKMVGLY
VCEKTVHTKN NKKMWFGTFL DAEGNFFDTT HFSTHTPVYP FRGKGCYLIL GKVATDFGFP
SIEVFRFAKL PLVDNPVMA
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