| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1343 |
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| Symbol | |
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| ID | 8252443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1600803 |
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| End bp | 1602092 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934997 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003091620 |
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| Protein GI | 255531248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCGCA TATCGTTAAA ACGCAAAACC CTGTTGAGCA TACTGTTGCT GTTACTTACA
GCGGTAACTG TAACAGCCCA GTCGCAAAAT ACCATTCAGC TCAGTTTAAA AGAGGCTGAA
AAACTTTTTG TACAAAATAA CTATCAGCTC CTTGTTCAGC AATACCAAAC CGATCAGGCC
CGGGCCGAAG TAATTACTGC CCGCTTGTTT GACAATCCTG AAATCAGTTA TGAAAACCTG
TTGTACAATC CTGAAACCAG GAGATTTCTG GGTACAAGCT GGGCCACCGG CCAGTACCAG
GCCTCGGTAT CACAACTGAT CAGGCTGGCA GGGAAGCGGA ATAAAAACAT CCAGCTGGCC
GCATCCGGGG TTAAAATGGC CGAATATCAG TACTTTGACC TGATGCGTAG CCTGCGCTTT
AACCTCAGTT CTACTTTCTA CAAAACCTAT TACAACCAGC AGTCGGCCAA AGTTTACGAA
CAACAGATCA ACTCGTTAAA GCTGCTGCTA AGCGCCAATG AGCAACAGTT AAAACTGGGC
AATGTAGCCC TTAAAGACAT CATCAGGATC AGATCCCTGC TTTATACCCT GCAAGGTGAG
TACAGCACCC TGATGAATGA AATTGAAGAT TCACAAACGG AACTTAAAAT GCTGACCAGC
CTGCCGGCAA ATTCCGATCT GTTGCTGCTT GTATCTCCGG AGGAAGAGCA AAATTATCAA
CCTGACAAAC AGGCATATAC CAATTTACTG GATTCGGCAC GAAACAACCG TGCAGACCTG
CAGCTGGCTA AAAGCGGAAT TACCTATGCA GAAAACAACC TCAGATTACA AAAGGCCAAT
GCCGTACCCG ATGTAGAGCT TTCACTGAGT TATGATATGA AAGGAAGTTA TCCCGAAAAC
TATACGGGTA TAGGCATTAA AATGCCCTTG CCACTGTTCA ACCGCAACCA GGGAGAACTT
AAAAAAGCCA GGATTGCCCT GGAAGCCGGG AAAACCCAAT TACGGCAACA GGATGCACAA
CTGGAAAATG AAGTATACAA CAGCTATACC TCGGCCCTGC GTACCGAAAA CTTATATCAG
GGTTTTGACA AGAATTTCAA TGCTGATTTT GATAAGCTGA TTGCCGAAGT GATCAAAAAT
TTCAAAAACC GAAACATCAG CCTTATTGAG TTTTTGGACT TCTACGACTC CTACAAGGCC
AGCACCCTGC AGATGAATAA CTTAAGATAC GAACGTATGA ACGCCAAAGA AGAAATCAAT
TTTGTAACCG GATCTAACAT TTTTAAATAA
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| Protein sequence | MVRISLKRKT LLSILLLLLT AVTVTAQSQN TIQLSLKEAE KLFVQNNYQL LVQQYQTDQA
RAEVITARLF DNPEISYENL LYNPETRRFL GTSWATGQYQ ASVSQLIRLA GKRNKNIQLA
ASGVKMAEYQ YFDLMRSLRF NLSSTFYKTY YNQQSAKVYE QQINSLKLLL SANEQQLKLG
NVALKDIIRI RSLLYTLQGE YSTLMNEIED SQTELKMLTS LPANSDLLLL VSPEEEQNYQ
PDKQAYTNLL DSARNNRADL QLAKSGITYA ENNLRLQKAN AVPDVELSLS YDMKGSYPEN
YTGIGIKMPL PLFNRNQGEL KKARIALEAG KTQLRQQDAQ LENEVYNSYT SALRTENLYQ
GFDKNFNADF DKLIAEVIKN FKNRNISLIE FLDFYDSYKA STLQMNNLRY ERMNAKEEIN
FVTGSNIFK
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