Gene Phep_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1253 
Symbol 
ID8252351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1477551 
End bp1478864 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content43% 
IMG OID644934906 
Producthypothetical protein 
Protein accessionYP_003091531 
Protein GI255531159 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.237005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC CTGAAATCCA ATCGGATGAA TGCTTATTCA AATTGCTGAA GCTGGGTGGC 
AGTATTGCGT TGTGCTTTGT CATTTTTGCT ACAGACCTCC CGGCACAGCA GGCCCATAGG
CAACAAACTG CATTAAGGAT CTCGAGTAGA AAAGTAACCA ATGACATGCC GCATATCCAT
GGAAGTATAT ATACCGATAG CAAGGCATCC AGTTTGTGTT CGGGAGATTT TATTTCAACG
GATAATGGAG AAAGCTGGGA AAATCGTCCA ATGACACCTG ATTTTGCCCT GAGACTTCCT
GTTGGTTTTC GCAGAGACCT TGTTGCCTCT ATATTTGATG CACGTCATGG AAGGATCTTG
GCAGTGCTTA ACGCCTTAGA TCTTGAAAAT CTGGATCCTG GTATCCGCGA ACCCCCTATA
GCGCAAAAGT CCTATTATCT GAGATACAGG GTATCGGATG ATGGGGGTAA AACCTGGAGG
TTTGATGAAC CTATTATTCA AAAAGGTGAT TTTACGGCAA AAAATCCTTT GCCCGGTGTT
TTTATCGGAA AGAATTCTAT CTATATTGGG GATAAGGGAT CAATGCCCCT CATTACCAAC
AAGGGAAAAA TTCTTGTGCC TGCGCAAACG ACTATAATAG GGGAGAAAGG AGAACTGTTT
AATCCCGGCA ATGGCCATAC TTATACCGAT GCGGTTGTAT TGATCGGAAG CTGGACAAAA
GACAATAGGA TTGCCTGGAA AATGTCTGAA CGTATAGTAG GTGATCCAAA ACGGTCAACC
AGGGGAATGA TTGAGCCCAC GCTTATAGAA CTTAAAAACG GGCATTTGGT TATGGTAATG
CGGGGTAGTA ACGAGCAAAA AGGGAGCAAG AGTCATACCT TACCCGGCTA CAAATGGTTG
TCGGTCTCGA AAGATGGCGG AGAAAGTTGG ACCAGGCCTG AGCCACTTAC TTTTGAAGGT
GGAAAAGAAC TATATTCTCC TTCTTCCATG TCTACTTTAT TTAAGCACTC CAGTGGTAGA
TGCTTCTGGA TAGGAAATAT GACTAAGGAT AATAACCAGG GAAACCTGCC CAGATGGCCG
CTGGTCTGTG TCGAACTGGA CACAAAAAGC TTTAAGTTAA AGGATAAGAC TTTATTGATC
TTAGACACCC AGCAGGAAGA CGATAAGTCC AAAGGAAGGT TAGATATTTC GCATTTCTCG
GTGATGGAAG ACCGGAATAC AAAAGAGATC ATCATCACGT ATCCACGGTC CTATAATGCT
TATAAGTCAC AAGAATGGGT CACTATCCGT ATGACAAATG AATTTAAGAA ATAA
 
Protein sequence
MTKPEIQSDE CLFKLLKLGG SIALCFVIFA TDLPAQQAHR QQTALRISSR KVTNDMPHIH 
GSIYTDSKAS SLCSGDFIST DNGESWENRP MTPDFALRLP VGFRRDLVAS IFDARHGRIL
AVLNALDLEN LDPGIREPPI AQKSYYLRYR VSDDGGKTWR FDEPIIQKGD FTAKNPLPGV
FIGKNSIYIG DKGSMPLITN KGKILVPAQT TIIGEKGELF NPGNGHTYTD AVVLIGSWTK
DNRIAWKMSE RIVGDPKRST RGMIEPTLIE LKNGHLVMVM RGSNEQKGSK SHTLPGYKWL
SVSKDGGESW TRPEPLTFEG GKELYSPSSM STLFKHSSGR CFWIGNMTKD NNQGNLPRWP
LVCVELDTKS FKLKDKTLLI LDTQQEDDKS KGRLDISHFS VMEDRNTKEI IITYPRSYNA
YKSQEWVTIR MTNEFKK