Gene Phep_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1250 
Symbol 
ID8252348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1475195 
End bp1475656 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content42% 
IMG OID644934903 
Productprotein of unknown function DUF450 
Protein accessionYP_003091528 
Protein GI255531156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.344127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.355238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTA TACCAACCCC GCTAAACCTG CCCCAATATC CTTTTAAAAT CACTTTAAAG 
GACACCAGGC ATTTTATATT TGATGAAATA CGGAAAAAGC ACCTGGTACT GACACCAGAG
GAATGGGTAA GACAGCATTT TATCCAGTAC CTTATCCTTG AAAAAAGATT CCCCAAATCC
CTCATCCAGA TAGAAGGCGG GCTTAATCTC AACCAGTTGC AAAAAAGAAC AGATATTGTA
ATTTTTAACA ACCAGGGCCA AAGGATCATG GTCATCGAAT GTAAGGCTCC CGCTGTAAAA
ATTACCCAGT CGGTATTTGA CCAGGCCGCC AGGTACAATT CAGTTCATAA AACCAGGTGG
CTTGTGGTAA CCAATGGTTT AAAGCATTGC TACGCTACCA TAAACCACCA GGAGGGGCAG
TTCGCGTTTG TTTCCGAATT ACCAGATTAC GGAATGCTGT GA
 
Protein sequence
MSFIPTPLNL PQYPFKITLK DTRHFIFDEI RKKHLVLTPE EWVRQHFIQY LILEKRFPKS 
LIQIEGGLNL NQLQKRTDIV IFNNQGQRIM VIECKAPAVK ITQSVFDQAA RYNSVHKTRW
LVVTNGLKHC YATINHQEGQ FAFVSELPDY GML