| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1217 |
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| Symbol | |
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| ID | 8252315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1436790 |
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| End bp | 1437662 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934872 |
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| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_003091497 |
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| Protein GI | 255531125 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.6801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.977815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCAG ATATACATAG CCCCTTACAA CCCTTAAATT TCTTTCATGG CTATCAGGTA
CTGGTAAAAA GGGATGATCT GATTGATCCT TTTATATCGG GGAATAAGTG GCGCAAACTG
AAATACATTT TAGCCGAAGC TGACCGGACC GGAAAAAATC ACCTGGTTAC CTTTGGTGGT
GCCTATTCCA ATCACCTGGT AGCTACCGCA GCCGCCTGTG CCAGGAATGG CTTACAAAGT
ACCGCCTTTG TACGTGGAGA AGCAGTTGAA AATGAAATGC TCCTGCTATG TAAACTTTAT
GGTATGCAAC TGCGGTTTAC CGACCGCTTA AGTTACCAGA ATAAACCTTT ATTATTTGAC
CGGTATTTTG GGGGCGACCA TACCGCTCTT TTTGTTGACG AGGGCGGTGC AGGCCCCCAT
GCGGTGAAGG GCTGCGCAGA AATTATTGCG GAATTGCCTG CAGATACAAG TCATTTATTT
TGTGCCGCCG GAACCGGGAC TACGGCAGCT GGTTTACTAA AAGGCATACA GGCTGCTCAG
CTAAAAACCA TATTGCATGT GGTTCCCGTG CTAAAAGGCG ACGATTTTAT TAGCCCTGAA
ATTTTAAAAT ATACGGGTCC TGACCATCGG CTCAGGGTAC ATACCGGATA CCATTTTGGT
GGCTATGCCA AAACAAGTCC GGCTTTAATT GAATTTATAA AGTACTTCAT TGCACATACC
GGCATTATGA TAGATCCGGT TTATACTTCA AAAATGTGCT ATGCATTGGC TGATCTGCTG
AAACATAACC ATTTCAACCC TGATGATAAA ATAGTAGTCC TGCATACCGG CGGCTTACTA
GGCCTGCTGG GCATGAAAGA GAAATTTCAT TAG
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| Protein sequence | MFADIHSPLQ PLNFFHGYQV LVKRDDLIDP FISGNKWRKL KYILAEADRT GKNHLVTFGG
AYSNHLVATA AACARNGLQS TAFVRGEAVE NEMLLLCKLY GMQLRFTDRL SYQNKPLLFD
RYFGGDHTAL FVDEGGAGPH AVKGCAEIIA ELPADTSHLF CAAGTGTTAA GLLKGIQAAQ
LKTILHVVPV LKGDDFISPE ILKYTGPDHR LRVHTGYHFG GYAKTSPALI EFIKYFIAHT
GIMIDPVYTS KMCYALADLL KHNHFNPDDK IVVLHTGGLL GLLGMKEKFH
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