Gene Phep_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1133 
Symbol 
ID8252227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1328897 
End bp1329862 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content42% 
IMG OID644934784 
Productprotein of unknown function DUF323 
Protein accessionYP_003091413 
Protein GI255531041 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.316154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.911277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCTA AATTATTGGG AGTGCTATTC TTTGTTTTTC TGGCCTTTCA GGTGCCGGCC 
CAGGAAAAAC ATGAAGCTTA TACGCAGCAA ATCAACGGGA CTAAGCTGAG CTTTGAAATG
AAAGCCATTC CTGCCGGAGA ATTCTTAATG GGCAGCAAAA AGGGCAAGGC AGATGAACAG
CCGGTACATC CTGTTAAGCT TGCGCCCTTT TGGATGAGTA CCTTTGAGGT TACCTGGGAT
ATTTTTGAAC CCTTTTTATA TAAAGATTAT GAAGCTAACC ATAGCACAGG CGCTATACCT
GCAAATGTAG ATGCAGTTAC CAGGCCTACA AAACCTTATT TAGATATGAC TTTTGGTATG
GGTAAAGAAG GGCAACCTGC TTTGGCAATG ACCCATTATA ATGCCATACA GTTTTGCAAA
TGGCTTTATG CAAGAACAGG AGTATTTTAC CGATTGCCAA CAGAAGCCGA ATGGGAATAT
GCCTGCCGTG CTGGTAGTAT TACAGAATAT GCGTTTGGGG ATGGAGCTGC TATGCTCGGT
GAATATGCCT GGTATAAGGA CAATTCTGAA GGTAAAACAC ATAAAGTTGG TCTGAAAAAA
CCAAATGCCT GGGGTTTACA TGATATGTAT GGAAATGTTG CTGAATGGAC TTATGATCAG
TACATTCCGG ATTTTTATGC TAAGGTGATA GGTGATAAAG TAAATAACCC TGTAGCTGTA
CCGGATAAAT TGTATGCGCA CGTAATCAGA GGTGGCTCTT ACGAGGATCT TGCTAAGGAT
TGCCGTTCGG CAACAAGATT ACCTTCTGAT CCTGTTTGGA AGCAGCTGGA TCCGCAGATA
CCTAAAAGCA ACTGGTGGTT TCCTGAAGCA CCTTTTATAG GTATGCGTTT GGTGAGGCCG
CTAAATATAC CTGCTAAAGA GGAAATAGAT GCATATTACA ATGCTGCCCC CCTAAAAGAT
TATTAA
 
Protein sequence
MESKLLGVLF FVFLAFQVPA QEKHEAYTQQ INGTKLSFEM KAIPAGEFLM GSKKGKADEQ 
PVHPVKLAPF WMSTFEVTWD IFEPFLYKDY EANHSTGAIP ANVDAVTRPT KPYLDMTFGM
GKEGQPALAM THYNAIQFCK WLYARTGVFY RLPTEAEWEY ACRAGSITEY AFGDGAAMLG
EYAWYKDNSE GKTHKVGLKK PNAWGLHDMY GNVAEWTYDQ YIPDFYAKVI GDKVNNPVAV
PDKLYAHVIR GGSYEDLAKD CRSATRLPSD PVWKQLDPQI PKSNWWFPEA PFIGMRLVRP
LNIPAKEEID AYYNAAPLKD Y