| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1064 |
|---|
| Symbol | |
|---|
| ID | 8252158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1251229 |
|---|
| End bp | 1252428 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644934716 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003091345 |
|---|
| Protein GI | 255530973 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT CAGTGTTAGG TGTGCTAACC TTATTTTTTA TTTCTTCCGT ATATGCTCAG
GATATGAGTT ACAATACAAT AACTACAACA TCTATAGATG CGAATAACCC AAATTCGATT
AGGATAATTG GACAAAATAA TCCTGTAGGC CCAGTGAGTG CGAGAAATAT ATCCTTTGAT
TTTGAATCTG CAGGTAAAGC GCAGATTCAA GCTTACCGAA ATAGTTCTAT GGGCACTACC
TTACAATTTT TAACAAATGA TGATGGAGAT CCATTTATGG GAGCGCCAAC TGTAAGAATG
CAGATCAGCA GGAACGGTAA TGTTGGCATT GGTTTAACCA ATCCAACTGC GAGATTGTCT
GTTGTTCACG GAGAAGGTTA TGGCAAAGTC GCAAATTTTA GCAGTGCACT TGGTGATGAA
CATGTGGGAA TTGGAACTGA AAGTAATGGA TTTTCGTGGA TTGGTACTAC TTCTAATCAT
AATTTTCAGA TTTATGCAAA TAACGAAGCA AAGTTATCTG TGCTTGCTAA TGGATCCGTA
GGGATTGGAA CGATTGCTCC AGCACATAAA TTAACCGTAT TAATGGATGC ATGGACAAAT
GGAGAGGGGG TAGCTGTACA GGCCGTTACT AGTACAGGTA CTGGCTCACA ACCTGGTTAT
GCGCTTTTAA ATTCATCTGG TAATAAAAGG ATGTATAGCT ATTTAGATGT ATTTACAGAT
ACTTATAATA TTGGAAATGC TTCTGGTACT AGTTTAATGA CACTGAATCA GAATGGCAAT
GTAGGAATTG GAACGGTAAC TCCCGGAGAA AAACTCTCTG TCAATGGCAA TATCCGAGCT
AAAGAGATCA AAGTTGAAAA TGCCAACTGG CCGGATTATG TATTCACGAA AGAATACCAG
CTCCCAACCC TTCAGGCAAC AGAAAACCAC ATCAAAGAAA AAGGCCATTT ACCAGGCATC
CCGTCAGCTG TGGAAGTAAA AGCCAATGGG ATTGATTTAG GGGAAATGAA TGCGAAGCTA
TTACAGAAGA TTGAAGAACT GACTTTGTAT ATGATTGAAC AGAACAAAAG AATTCAAACT
CAGAATGAAA AATTAGCTCT TCAGGAAATG CTGAGCATTG CCAGTAAAAA AGATTCTGAA
CTGCAACAAA AGCAAATTGA TCAGCTTAAA CAACAGTTGC GGGAAATTAA CCTCAAATGA
|
|---|
| Protein sequence | MKISVLGVLT LFFISSVYAQ DMSYNTITTT SIDANNPNSI RIIGQNNPVG PVSARNISFD
FESAGKAQIQ AYRNSSMGTT LQFLTNDDGD PFMGAPTVRM QISRNGNVGI GLTNPTARLS
VVHGEGYGKV ANFSSALGDE HVGIGTESNG FSWIGTTSNH NFQIYANNEA KLSVLANGSV
GIGTIAPAHK LTVLMDAWTN GEGVAVQAVT STGTGSQPGY ALLNSSGNKR MYSYLDVFTD
TYNIGNASGT SLMTLNQNGN VGIGTVTPGE KLSVNGNIRA KEIKVENANW PDYVFTKEYQ
LPTLQATENH IKEKGHLPGI PSAVEVKANG IDLGEMNAKL LQKIEELTLY MIEQNKRIQT
QNEKLALQEM LSIASKKDSE LQQKQIDQLK QQLREINLK
|
|---|
| |