| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1013 |
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| Symbol | |
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| ID | 8252107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1183888 |
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| End bp | 1184703 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934667 |
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| Product | PAS sensor protein |
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| Protein accession | YP_003091296 |
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| Protein GI | 255530924 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC GCACTCAACC TCTTTTAGCT AATCATATCC GTATTAAAAA AAAGATTGTC
CTGCTCTACC TGCTGATTGG TTTTACCTTA CTGTTTGTAG CAAGCGTATT GATCAATGTT
TTCGACAGCA AGCATCCGGA AACAGATTTT CGCTTTCTGC ACCATTATAA GTATATCTTG
TTCATCCTGA TTACTGCAGT GGCATTATAT ATATTACTTG GCATACATTA TAAAGATCTC
TCAACCATTG AAGACAATTA TTATAAATTA TTTGAAGGCT CACCGGGCGC TGTATATGTT
ATGGAGAAAT CCGGATTCAG GTTTTTGGCT GTAAACGACG TGATGGTGAG AAAATATGGA
TACAGCCGTG AAGAGCTGCT CAAAATGTCG GCCCTGGATA TACGGCCCGA AGTGGAGCGT
AAAAAGTTAA AAGACTATTT GTATTCAGCC CATGATGAAG GACATGACAC GGGCATCTGG
TTACATCAGA AAAAAAATGG GGACTTATTT TATGTACTCA TCTCCCACCA CTCTGTGAAA
TTCCAGGCTC AAGAGGCCTA CGCGGTTATT GCCATAGATA TTGACCAGAA CATCAGGAAT
GAAAAAAGGT TACGTGAAAT AGCCTGGACC AATTCTCACG AGATCAGAAA GCCTGTCAGC
AATATTTTGG GATTGGCGGA ACTGATAAAA ACATGCGACC CTATGGAGCC TTTGGACCCC
AGACTGGTAG ACCTGCTGAG TGTTTCGGCC AGCGAACTGG ATATTATAGT AAAAAAGATC
AATCTGCACG CCAAGGAACT CGACAGAAAA TTTTAA
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| Protein sequence | MKTRTQPLLA NHIRIKKKIV LLYLLIGFTL LFVASVLINV FDSKHPETDF RFLHHYKYIL
FILITAVALY ILLGIHYKDL STIEDNYYKL FEGSPGAVYV MEKSGFRFLA VNDVMVRKYG
YSREELLKMS ALDIRPEVER KKLKDYLYSA HDEGHDTGIW LHQKKNGDLF YVLISHHSVK
FQAQEAYAVI AIDIDQNIRN EKRLREIAWT NSHEIRKPVS NILGLAELIK TCDPMEPLDP
RLVDLLSVSA SELDIIVKKI NLHAKELDRK F
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