Gene Phep_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0898 
Symbol 
ID8251992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1050812 
End bp1051663 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content40% 
IMG OID644934553 
Producthypothetical protein 
Protein accessionYP_003091182 
Protein GI255530810 
COG category 
COG ID 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00148019 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGAAA AGAATAGCCG TTACATTGAT CCACTCACCG ACTACGGATT TAAACGCTTG 
TTTGGAAACG AACCAGACAA AGACATTATG ATCGAATTTT TAAATGCCCT GTTTGAAGGC
GAAAAAATCG TCATCGACAT CAGATACAGC CCCACCGAAC ATGCCGGAGA AGATGTCAAA
GAAAAAAAGG TACTCTTCGA TTTAACCTGT ACCGGCGCCG ACGGTGAGAC TTTCATCATC
GAGATGCAGC GGGCAGACCA GGAATTTTTC AGAGACAGGT GCGTGTTTTA CATGTCACGG
CTCATCAGCG CCCAGCTACC CAGGGGTACA TCCAATTGGG ATGTTCCGCT CAAAGAGGTT
TACCTGATTG GTATTATGGA GTTCCAGTTT AACAACATCA ACAGCAATTA CCTGCACAAC
ATTGCCCTCA TGAACAGAGA CACCGGTAAG GTTTTTTACA AAGGAATGGG CTATAAGTTT
CTTGAATTAC CTAACTTTGA TAAAAAAGAA AGCGACTTGG TAACAGAGTT GGACAAATGG
TTTTATTTGT TAAAGAACCT GAGCCATCTG GATAAAATTC CTGATTTTTT GGACAAAAGG
GTGTTCCAGA AAATTTTTAA AATTGCGGAG ATGAGTAAAA TGACTAAAGA AGAACGTGAA
TTGTACGACT CAGATGTGAA AGCAAAATCT GATTGGAATG CGGGTATTCG TTACGCAGAA
AAAAAGGCAA AGGAAGAAGG TAAGCTGGAA GAGAAATTGG AAATTGCACG CAATCTCAAG
AGCAAAGCAA TAGCTTTTGA AATAATAGCT GAAACGACTG GTCTTTCTAT TGACGAAATA
GAAAAATTAT AA
 
Protein sequence
MTEKNSRYID PLTDYGFKRL FGNEPDKDIM IEFLNALFEG EKIVIDIRYS PTEHAGEDVK 
EKKVLFDLTC TGADGETFII EMQRADQEFF RDRCVFYMSR LISAQLPRGT SNWDVPLKEV
YLIGIMEFQF NNINSNYLHN IALMNRDTGK VFYKGMGYKF LELPNFDKKE SDLVTELDKW
FYLLKNLSHL DKIPDFLDKR VFQKIFKIAE MSKMTKEERE LYDSDVKAKS DWNAGIRYAE
KKAKEEGKLE EKLEIARNLK SKAIAFEIIA ETTGLSIDEI EKL