| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0828 |
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| Symbol | |
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| ID | 8251917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 976959 |
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| End bp | 978512 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934478 |
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| Product | phosphodiesterase |
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| Protein accession | YP_003091112 |
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| Protein GI | 255530740 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.894152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATAT TAGGATATGT ACTGGCCGGC CTTGTGGTTG GTGTTCTGGT GGGGAGGTAC
CTGTTAAGGA ACCTGCTCAA AGCGCAAGAA ATTGCAGCCC AGACCAAAGT AAAAAAGATG
CTGAAAGATG CTGAAAGCAA GGCTGAGATT TTAAAAAAGG ACAGGCTGCT GGAAGCAAAA
GAGAAATTTT TACAATTGAA GTCGGAACAC GAACAGGAAG TAAATGCAAA AAATAACCTG
ATCAATCAAC GCGAAAACTC ACTTAAGCAA AAAGAACAAT CTTTAAATTC TAAACTGGAA
AATGCCAGCC GCAAAGAACA GGAACTGGAT AACCATAAGA AGAATCTGGA AAAGCAAACT
GAAATTGCCA TAAAGAAACA GGAAGAGGTT GACTTACTAA AAAACCAGCA TGTTACCCAA
CTGGAAACAA TTGCCGGTTT AAGTGCTGAG GAAGCCAAAA GCCAATTGGT AGAGACCATG
AAACAGGAAG CCCGTACGCA GGCCATGATC CAGGTAAAGG ACATTGTGGA TGAGGCTAAA
CTGACTGCGA CTAAAGAAGC TAAAAAGGTG GTTATCCAGA CCATACAGCG TACTGCGGTA
GAGGCTGCGA TCGAAAACAC GGTGTCTATC TTTCATATTG AAAGTGATGA GATCAAGGGC
CGTGTAATTG GCCGCGAAGG TCGTAACATT CGTGCACTTG AGGCTGCTAC AGGAATCGAG
ATCATTGTAG ATGACACTCC TGAGGCCATC ATTTTATCGG GATTTGACCC GGTAAGGAGA
GAGATTGCCC GTTTGGCCCT GCACCGTTTG GTAACAGATG GCAGGATTCA CCCTGCGCGT
ATTGAAGAAG TGGTTGCCAA AACGAAGAAA CAGATTGAAG ATGAGATTGT AGAGATTGGC
GAAAGGACGG TTATTGACCT AGGTATCCAT GGTTTGCACC CTGAACTGAT CAGGATGGTT
GGACGTATGC GCTACCGTTC TTCTTATGGA CAAAATTTAT TGCATCACTC GCGTGAGGTA
GCAAATTTTT GTGCTACTAT GGCGGCCGAG TTGGGTTTAA ATGCTAAAAT GGCCAAGCGT
GCCGGATTGT TGCATGATAT AGGTAAGGTG CCTGATGATA ATCCTGAATT GCCACACGCA
ATTTTGGGTA TGCAGCTGGC AGAAAAATAT AAAGAGCATC CGGAAATATG CAATGCCATT
GGCGCTCACC ACGACGAGAT CGAAATGACT TCAATGATCT CGCCGATTAT CCAGGCTTGT
GATGCCATAT CCGGTGCCCG TCCGGGTGCC CGACGTGAAG TTGTTGAAAG TTATATCAAA
CGTTTAAAGG AACTGGAAGA ACTGGCACTT TCTTATCCAG GAGTAGAAAA GACCTTTGCC
ATACAGGCAG GTCGTGAGCT TCGTGTAGTG GTAGAAAGTG AAAGGGTAAC AGACCAGCAG
GCGGAACTGC TTGCTGCAGA TATCTCTAAC CGTATACAAA CGGAAATGAC TTATCCCGGA
CAGATTAAGG TAACAGTAAT CAGGGAAACA AGATCGGTAG CTTTTGCAAA ATAG
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| Protein sequence | MEILGYVLAG LVVGVLVGRY LLRNLLKAQE IAAQTKVKKM LKDAESKAEI LKKDRLLEAK
EKFLQLKSEH EQEVNAKNNL INQRENSLKQ KEQSLNSKLE NASRKEQELD NHKKNLEKQT
EIAIKKQEEV DLLKNQHVTQ LETIAGLSAE EAKSQLVETM KQEARTQAMI QVKDIVDEAK
LTATKEAKKV VIQTIQRTAV EAAIENTVSI FHIESDEIKG RVIGREGRNI RALEAATGIE
IIVDDTPEAI ILSGFDPVRR EIARLALHRL VTDGRIHPAR IEEVVAKTKK QIEDEIVEIG
ERTVIDLGIH GLHPELIRMV GRMRYRSSYG QNLLHHSREV ANFCATMAAE LGLNAKMAKR
AGLLHDIGKV PDDNPELPHA ILGMQLAEKY KEHPEICNAI GAHHDEIEMT SMISPIIQAC
DAISGARPGA RREVVESYIK RLKELEELAL SYPGVEKTFA IQAGRELRVV VESERVTDQQ
AELLAADISN RIQTEMTYPG QIKVTVIRET RSVAFAK
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