Gene Phep_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0821 
Symbol 
ID8251910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp970372 
End bp971217 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content42% 
IMG OID644934471 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003091105 
Protein GI255530733 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA AGATTCAATT GTGTATGGCT ATGCTGTTGC TGGTGGTAAC GGTAAAGGCC 
CAACGGAAAC CCGCTGATTA TATCAATGTA ATGAGTTATA ACATTCGTTA TAACAATGAT
AAAGATGGGG AGAATGCCTG GCCAAACAGA AAAGATGAGG TAAAGGCACT CGTAAGGTTT
CATGATGCCG ATATTTTATG TGTGCAGGAG GCCCTGGCTT TGCAGGCAGA CCAGTTGCTG
GAAAATACAA ATTACGAAAT GGCCGGTGTA GGGCGCACTG ACGGAAAACG TGAAGGGGAA
TTTTCTGCTG TTTATTTTGA CAAAACCAGA TTTGTTAAAA AGGATGGAGG TACCTTCTGG
CTGTCGGATA CGCCCGAAAA ACCATCTAAA GGCTGGGATG CAGCCATAGT AAGGATCTGT
ACCTGGGTCA GGCTATATGA CAAATGGAAT AAGAAGGAAT TTATGGTTTT TAATACCCAT
TACGACCATG TTGGTGTACA GGCCAGAATT GAATCGGCCA AACTTATTAA AAAGAAGATC
CAGGAAATTG CACCAGCTTT GCCGGTCGTT TTAACAGGTG ATCTAAACGT TACACCTGAA
ACAGAAGCCA TAACTACCAT AAAAACTTTT TTAACGGATA GCAAAGAAGT GTCGGAAGAG
CCAGCTTATG GGCCGGAGGG AACCTTTAAC GGCTTTAAGT TTAATGCCCC GCTTAAAGAG
AAAATTGATT ATATCTTTAT AAATAGAGGT TTTAAGGTGC AAAAGTTTGC CGTGCTTACC
GATAGTAAAA ACCAACGCTA TCCATCCGAT CACCTGCCTA TCATGGCGCG TCTGTTTTTT
AAGTAA
 
Protein sequence
MKIKIQLCMA MLLLVVTVKA QRKPADYINV MSYNIRYNND KDGENAWPNR KDEVKALVRF 
HDADILCVQE ALALQADQLL ENTNYEMAGV GRTDGKREGE FSAVYFDKTR FVKKDGGTFW
LSDTPEKPSK GWDAAIVRIC TWVRLYDKWN KKEFMVFNTH YDHVGVQARI ESAKLIKKKI
QEIAPALPVV LTGDLNVTPE TEAITTIKTF LTDSKEVSEE PAYGPEGTFN GFKFNAPLKE
KIDYIFINRG FKVQKFAVLT DSKNQRYPSD HLPIMARLFF K