Gene Phep_0777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0777 
Symbol 
ID8251866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp913920 
End bp915140 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content44% 
IMG OID644934427 
Productoxidoreductase domain protein 
Protein accessionYP_003091061 
Protein GI255530689 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG AAGAACTTTC GAGAAGACAG TTTTTAAGCA AAAATGCGAT TGCGCTATCA 
GGGATCGCCT TAAGTTATGC TGGTTTGCCT TTATGGGCAC AGGCAAAGGC TAAAAATGAA
GTGATCAGGG TTGGACTGAT CGGCACGGGG TCAAGGGGCA CAGGTTTAAT AAAGCTGATA
CAAGGTATTC CCGAGATGCA GGTTGTTGCC TGCTGTGACC CCATTGCCGA ACATCTTGCA
AATGGTATCA AACAGGCTGC AAGAGGGGCC AAAGCTTATA CCGACTACCG TACGTTACTG
GAAGATAAAA ATATTGACGC CGTAATTATC GCAACACCAC TTTATTTGCA CTATCCGATG
GCTGTAGCTG CTTTGTCTGC AGGAAAACAC ATCTACCTGG AGAAATCCAT GACTTATGAC
ATAAGCCAGG CCATAGAGCT GGAAAAAAAA GTGAACCAAT CTAAACTTGT ATTCCAGGTA
GGTTATCAGT ACCGTTACTA TGGCCTGTAC CATAAAGTAA AAGAAGTTAT GACCCAGAAC
TGGCTGGGTA ACATCACACA TTTTGAATGT CAGTACAACA GGAATTCCAA CTGGAGATTT
CCGGTGAGCG ACCCTAAAAT GGAACGGGCC ATCAACTGGC GAATGTATAA AGCATATTGC
GGGGGACCAT TATCAGAACT CTGCGCCCAT GCCATAGATG CAGTACATTA CCTTACAGAC
AGCCATCCTT TAAAGGTGAC GGCCATGGGC AGTGTGAACT ACTGGAAGGA TGGCAGGGAT
ACCTACGACA ACATCAGGGC CATTTATCAA TACCCTAAAG ACATTAAAGT GAGTGTTACT
TCTGTACTTT CCAATGCCTA TAATGGCTAC GGCATCCGCA TTTTAGGTGA CAAGGCCACA
TTGGAAATAC AACGCGATAA GGCTTTTATT TATCCGGAGG TGCTGAGCAA TAAACGGGGC
ACGGTTGATG GAGTAACCGG GGCAACTATT GCTGTAACTA CGCAGGGCAA GGGCAATGAA
CTGGTTTTTG AAAAACCAGG AGAAAAATCC TTAGAGCCAA CGGTGTATGC ATTGAAAGAT
TTCGTAAATT GTATTTTAAC AAAAAGCAAA CCTGCATCCA ATGCGACTAC AGCGAAGGAT
TCGTCCATAG CGATTCACAT GGGCAATACA GCGGCCGAAA CGGAAACGAT GCAAATTTGG
AAACCTGAAT ATTCTAGCTA G
 
Protein sequence
MKKEELSRRQ FLSKNAIALS GIALSYAGLP LWAQAKAKNE VIRVGLIGTG SRGTGLIKLI 
QGIPEMQVVA CCDPIAEHLA NGIKQAARGA KAYTDYRTLL EDKNIDAVII ATPLYLHYPM
AVAALSAGKH IYLEKSMTYD ISQAIELEKK VNQSKLVFQV GYQYRYYGLY HKVKEVMTQN
WLGNITHFEC QYNRNSNWRF PVSDPKMERA INWRMYKAYC GGPLSELCAH AIDAVHYLTD
SHPLKVTAMG SVNYWKDGRD TYDNIRAIYQ YPKDIKVSVT SVLSNAYNGY GIRILGDKAT
LEIQRDKAFI YPEVLSNKRG TVDGVTGATI AVTTQGKGNE LVFEKPGEKS LEPTVYALKD
FVNCILTKSK PASNATTAKD SSIAIHMGNT AAETETMQIW KPEYSS