| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0668 |
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| Symbol | truA |
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| ID | 8251756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 777501 |
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| End bp | 778286 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934317 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003090952 |
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| Protein GI | 255530580 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.252999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCGTT ATTTTATCGA ATTGTCTTAC GACGGCACCC CATATCATGG CTGGCAGATC
CAGCCAAATG CGACCACTGT GCAGGAATAT TTGGACAGCG CACTGACTGT TTATTTTAGG
CAGCCGGTAA GTACGTTAGG CTGCGGACGT ACAGATACCG GTGTCCATGC CAGCCAGTTC
TTCGCACACT TCGACCTGCA AACTGAAGCC GAACAAAGTG AGGCCACAGG TATACCGGCC
TCAAAATGCC CTGACCCATT GCGTTCAGTT AATGGTATTA ATGCCCTGCT GCCTTACCAG
ATTGCAGTAA AACGTGTTTT TGAAGTTGCA AATACCGCCC ATGCCCGTTT TGATGCTACA
GCGCGCGCCT ACCATTACCA CATTCATTTT CATAAAAACC CTTTTAAGCT GAACCGTTCC
TGGTTCCATA AAGGCGAACT GGATATGGAT GCCATGAACC GGGCTGCCAG CATACTTTTA
GCTCATAGCG ATTTTTCCTG CTTCAGCAAA TCACATACCC AAACCTTTAC CAATAACTGC
AAAATAACGG AGGCCTTTTT TGAAGAGATG GAAGATGGCG CTTTGCGGTT TACCATAAGG
GCCGACAGGT TTTTAAGAAA TATGGTGCGG GCAATTGTAG GTACACTGAT CAGAATTGGC
AAAAATGAAC TTAACTTAGC AGAATTCGAA CAGATTATTA AAAGCAAAAA CCGCAGCAAT
GCCGGGCAAT CTGTTCCCGC CTGTGGTTTG TATTTAGTAA ATGTAATTTA TCCCTTTGTG
AAATAA
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| Protein sequence | MQRYFIELSY DGTPYHGWQI QPNATTVQEY LDSALTVYFR QPVSTLGCGR TDTGVHASQF
FAHFDLQTEA EQSEATGIPA SKCPDPLRSV NGINALLPYQ IAVKRVFEVA NTAHARFDAT
ARAYHYHIHF HKNPFKLNRS WFHKGELDMD AMNRAASILL AHSDFSCFSK SHTQTFTNNC
KITEAFFEEM EDGALRFTIR ADRFLRNMVR AIVGTLIRIG KNELNLAEFE QIIKSKNRSN
AGQSVPACGL YLVNVIYPFV K
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