Gene Phep_0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0645 
Symbol 
ID8251733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp754329 
End bp755390 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content41% 
IMG OID644934294 
Producttetraacyldisaccharide 4'-kinase 
Protein accessionYP_003090929 
Protein GI255530557 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1663] Tetraacyldisaccharide-1-P 4'-kinase 
TIGRFAM ID[TIGR00682] tetraacyldisaccharide 4'-kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAT ACCTTAGGCT AATATTGCTC CCTTTTTCTG TGTTTTATGG CCTGGTGGTT 
GTATGCAGAA ATCAGCTGTA CAACATGGGG CTGTTTAAAT CAACCAGTTT CGATATTCCG
GTAATCTGTG TAGGAAACCT GGTTGTAGGC GGTTCGGGTA AAAGCCCCGT AACCGAATAC
CTGGTTAACT TATTGGGCGG TTATAAAATA GCTATTTTAA GCAGGGGATA TGGCCGTAAA
ACCAAAGGTT TTATCCTGGC CGATGAAAGG GCCACTGCAG AGACTATTGG TGATGAACCC
ATGCAGTTTT ATCATAAATT TGCCCATGTT ACCGTGGCCG TATGTGAAGA CAGGGTAAAG
GGAATCCGTT TGCTAAAAGA CCAACATGAT GTGATTATAC TGGATGATGC CTATCAGCAC
CGCGCAGTGC GGGCAGGTTT CAACGTTTTG CTGTTTGAAT ACGAAAAGTT GTTAAAACGC
CAGTTTTTGT TGCCAGCAGG AAACTTAAGG GAGCCCTTTA GCGGCTATAA AAGGGCCGAT
TTGCTGCTGG TTACCAAAGC ACCTGGGCAG CTTGACGCTA TAAAACGATC AATGTGTAAG
GATAGATTTA ATGAAGGGCC ACCAAAGCAG CTGTTTTTTT CATTTATTAC CTATGGCAAC
CTGAAGCATT TATTTTCCGG GCAGGAACAG GTGTGTTCGG CATTGCCGGC CGATACAAGT
ATTTTTTTGC TTACCGGAAT AGCCAATCCA GCTCCTTTAG TATCGCATTT GAAAAATTAT
TCGGCCAATA TCCGGCACTA TGACTATCCC GATCATTACC AATTCGGCAA ACAGAACATC
TTGCAGCTGG TAAATGCCTT TAACAGTGAT CCTAAAAAAG AAAAGATCAT TGTAACAACA
GAAAAGGATG CACAGCGTTT ATTAGCTATT ACCTTAAAAG AATTACTGTT AAATTTACCC
GTCTTTTATT TGCCAATTAA AATAGCCTTA CAAGACGAAG ATAAAACTAC CTTTGATCAA
AAGATTTTAA ATTATGTTTC AAGCACTACA CGAAACCGTT GA
 
Protein sequence
MIKYLRLILL PFSVFYGLVV VCRNQLYNMG LFKSTSFDIP VICVGNLVVG GSGKSPVTEY 
LVNLLGGYKI AILSRGYGRK TKGFILADER ATAETIGDEP MQFYHKFAHV TVAVCEDRVK
GIRLLKDQHD VIILDDAYQH RAVRAGFNVL LFEYEKLLKR QFLLPAGNLR EPFSGYKRAD
LLLVTKAPGQ LDAIKRSMCK DRFNEGPPKQ LFFSFITYGN LKHLFSGQEQ VCSALPADTS
IFLLTGIANP APLVSHLKNY SANIRHYDYP DHYQFGKQNI LQLVNAFNSD PKKEKIIVTT
EKDAQRLLAI TLKELLLNLP VFYLPIKIAL QDEDKTTFDQ KILNYVSSTT RNR