Gene Phep_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0640 
Symbol 
ID8251728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp748368 
End bp749600 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content42% 
IMG OID644934289 
Productphosphate-selective porin O and P 
Protein accessionYP_003090924 
Protein GI255530552 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG TTTTATCCGT TTTATTGCTT TTCTGTTCAT GTTTTGCCTT TGGGCAAAGC 
AATAACTCAC CATCAACTTA CGATCCGCAT GAAATTGCCA TTACCGGCTA TCTGCAAACA
CAATATCAAA GGGCACAATC GGCGGGGATT TCTTCCTTTT CTGGAGGCGA CTTTGCAAAA
AACTCGAAAG ATCGTTTTAT GATCCGCAGG GGAAGGTTAA AAATTGACCG GGCAGATAAG
TATTCGAGCA TTGTTTTTCA GATTGATGCT ACCCAAAACG GAGTACAGCT AATGGATGCT
TTTATACAGT TACACCGACC GGAGTCAAAA GCATTGTTAT TTACAGCCGG ATTGTTTAAC
CGTCCTTTTG GATATTCTAT TGTTTATTCA TCAGGTTACA GGGATTTCCC TGAAAGGGCA
AGGGTATTCC AAACACTGAT GCCCCGTGAA AGGGATCTGG GAGCAATGCT GACGTTCAGG
CCAGATGGCA AATTTCATTT TCTTACTGCC GAATTGGCTG TAATAAACGG AAGCGGGCAT
TCGGCCAGGG ACTATGATTC AAAAAAGGAT TTTGTAGGCA ACCTCGGCTT TAAATTTGAT
AGTCTTGCCA ATAAAAAACT TCAGCTGGGC TTTGGAGGCT CTTTTTATAA AGGATCTGTA
CGTAGCGACA CGGAGAGTTA TTTTACAAGC AATGGAAATG GCTTTTTTAA AAATACAAGC
CCGGATAATA TAGACTGGAA TGCAAAACGC GATTATTATG GGGCAAACCT GCAATTGCAA
TACGACAATA CTTTTGGTGC CACCTCATTT AAAGCAGAAT ACATTGGTGG AACACAACCC
GGTGTAGCCA GCACAGCACT CATAACGGGG CCCGCAGCCA GTACCAGCTT TTCTACCCAG
CCCAACACTG ATCTGTACCT GCGCCCATTT GAAGGATATT ACCTTTGGCT ATCCCAGCGT
ATAGCCAAAA GCAGGTTTAC AGCTTTGCTT GCTTATGATG TTTATGATCC GAATAAAGAT
GTGAAAGAAA CAGAAATTGG GGCAAACAAC AATACAACCG CTGCAGACAT TAAATTTAAT
ACATTGGGCT ATGGCATGAC CTGCCTGGTT AACACAAGGG TTAAGCTCAC TGTATACAAT
GAACATGTTG TAAATGATCC TACGCAGTTG CCAGGGTATA TGAATGACCT TAAAGACGAT
GTTTTTACAG TAAGACTGCA ATACCGCTGG TAA
 
Protein sequence
MKQVLSVLLL FCSCFAFGQS NNSPSTYDPH EIAITGYLQT QYQRAQSAGI SSFSGGDFAK 
NSKDRFMIRR GRLKIDRADK YSSIVFQIDA TQNGVQLMDA FIQLHRPESK ALLFTAGLFN
RPFGYSIVYS SGYRDFPERA RVFQTLMPRE RDLGAMLTFR PDGKFHFLTA ELAVINGSGH
SARDYDSKKD FVGNLGFKFD SLANKKLQLG FGGSFYKGSV RSDTESYFTS NGNGFFKNTS
PDNIDWNAKR DYYGANLQLQ YDNTFGATSF KAEYIGGTQP GVASTALITG PAASTSFSTQ
PNTDLYLRPF EGYYLWLSQR IAKSRFTALL AYDVYDPNKD VKETEIGANN NTTAADIKFN
TLGYGMTCLV NTRVKLTVYN EHVVNDPTQL PGYMNDLKDD VFTVRLQYRW