Gene Phep_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0557 
Symbol 
ID8251644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp664649 
End bp665602 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content36% 
IMG OID644934206 
Producthypothetical protein 
Protein accessionYP_003090842 
Protein GI255530470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.351374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGG GGATAAAAAG GACATTTATA CCAGGGGATA AATGGATTTA TTTTAAATTG 
TATACCGGGT ATAAAACAGC AGATAACATT TTAAGTAAAA CATTACCGGC TATTATCTCT
CAGCTAAATA CCGAAAATGT GTTAGATAAA TGGTTCTTTA TCCGTTATTC TGATCCTAAA
TTTCATTTGC GGCTGCGGTT CTGCTTAAAG GATGCAAAAA ACATTTCCTC TGTAATCTCC
CTGTTTAACC GGGAAATGAG CCCTTACATT GATGAAGATC TGATATGGAA AGTGCAGATA
GACACTTATC AGCGGGAACT GGAACGTTAC GGTACAACAA CCATGGAACA TTCCGAATCT
ATGTTTCATT TTGATAGTGA AGCAATACTT AGCATACTTA GTATACTTAG TATCCCTGAA
TATAATGAAT CCGATCAACA ACGATGGCTG CTGGCATTAA AAATACTCGA TGCCCTGCTC
TTTGATTTTG AACTCGGCAT GGACCAAAAA ATTGCATTAT TAACTGAGTT AAGCGAAGAT
TTTAAAAAAG AGATGGGATT TACCATAAAA GGATATAAAC TGCAATTGGA TAAAAAATTC
AGGACTCATC GTAAATTAAT AGAAGAAATA ATGGGCACAC CCGAACAAGC ATCATGGGCA
ATCCCTTTAA TGGAAATTAT CAGACAAAGA TCCTTAAAAG TAAAGCCAAT TGCCGGGACA
TTGTTGCAAA TGGAAATGAA TCAGAAATTA GAAGTTTCGT TACATAGTTT ATTGAGAAGT
TATATTCATA TGACGATCAA TCGCTTGTTC AGGTCAAAGC AACGTGTATA TGAGCTGGTT
ATTTATGATA TGCTGGAAAG ATATTATTCT TCTTTAAAAG CAAGAAGCAA AAATACTGCA
GGCAAAATGC ACCGGGCTTC CATTGAGGCA TTACCACAGG TTGTGATAAC TTAA
 
Protein sequence
MDKGIKRTFI PGDKWIYFKL YTGYKTADNI LSKTLPAIIS QLNTENVLDK WFFIRYSDPK 
FHLRLRFCLK DAKNISSVIS LFNREMSPYI DEDLIWKVQI DTYQRELERY GTTTMEHSES
MFHFDSEAIL SILSILSIPE YNESDQQRWL LALKILDALL FDFELGMDQK IALLTELSED
FKKEMGFTIK GYKLQLDKKF RTHRKLIEEI MGTPEQASWA IPLMEIIRQR SLKVKPIAGT
LLQMEMNQKL EVSLHSLLRS YIHMTINRLF RSKQRVYELV IYDMLERYYS SLKARSKNTA
GKMHRASIEA LPQVVIT