| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0459 |
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| Symbol | |
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| ID | 8251546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 545953 |
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| End bp | 546678 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644934109 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_003090745 |
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| Protein GI | 255530373 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.336833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGCATA AAACCAGGGG CATTGTTTTA AAAACCACTT TATACAGTGA AAGCAGTGTG
ATCGTGCAGA TTTTTACAGA AAAATTCGGC ATACAATCTT ATATCATCAA TGGAGTTAAA
AAACCGAGGG CCAAAATCAG TATGAACATG TTACAGCCCC TGCACCTGGT AGACATGATT
GTTTACCATA AGGCCAATAC AAATATACAG CGTGTTTCAG CGCTCAGGCC ATCCCCGGTT
TTCCGCAGCA TTCCTTACGA CATCATTAAA AGTACCATTG TACTTTTCCT GAATGAAGTA
TTGTACAAAA GCATCAGGCA GCAAACCACG GATGAGCATT TATTTGATTT TATTTTTAAT
GCGATATGCT GGTTTGATGA AACAGAAGAA TTAAACGTAA ATTTTCATCT TTCTTTCCTA
TTAAAGCTTT CCCGTTTCCT GGGATTTGCA CCAAGCACCC TAACCAAAAG TAACCAGAGT
TTTTTCGATC TGCAAGAAGG GGAATTCAGA TCTTCAGCCC CTGTGCATGC CCATTTCCTG
GATAAAGACG ATGCGGCATT ATTTATTTCC CTGTTTTCTT TGCCTCTTGA AAAAATAAAT
GAAATAACCC TGGAAAACAA AACCAGACGA TCCATCCTAG ATAAAATACT GGTTTACTAC
ACTTTACATA CCGCGTCTTT TGGAGAAATC CGTTCGCACC AGGTCCTTGA GGATGTGCTC
TCGTAA
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| Protein sequence | MLHKTRGIVL KTTLYSESSV IVQIFTEKFG IQSYIINGVK KPRAKISMNM LQPLHLVDMI
VYHKANTNIQ RVSALRPSPV FRSIPYDIIK STIVLFLNEV LYKSIRQQTT DEHLFDFIFN
AICWFDETEE LNVNFHLSFL LKLSRFLGFA PSTLTKSNQS FFDLQEGEFR SSAPVHAHFL
DKDDAALFIS LFSLPLEKIN EITLENKTRR SILDKILVYY TLHTASFGEI RSHQVLEDVL
S
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