Gene Phep_0453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0453 
Symbol 
ID8251538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp537788 
End bp538609 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content43% 
IMG OID644934101 
Productperiplasmic ATP/GTP-binding protein 
Protein accessionYP_003090739 
Protein GI255530367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.879062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAT ACCTTGTCGT TATTTTTATG GTTACTGCGT CACTGAGTTT GAAGGCCCAG 
CACAGCCTCG AAAAACTTTG GGAAACAGAC AGTGTGATCA ATTTACCAGA ATCTGTTTTG
CCCGATATAA AAGCGGGTAT CCTGTATGCT TCTGTAATGG GCAATAATCC GAACGATAAG
GACGGCATTG GTGGCGTTGC CAAGCTGAGT ACTACTGGTA AAATGATTGA TCATGACTGG
ATCACCGGTT TAAATTCGCC AAAAGGACTG GGCAGGTTTG GGAATACCCT ATATGCTGCA
GACCTGAGTG ATGTAGTGGT GATTGATATG GCGAAAGGAA AGGTAAAACT CAAAATACCG
GTAGACAGTG CAAAATTTTT GAATGACATT ACAGTAAGTG ATAAGGGCAT TGTATATGTT
TCTGATTCGA GGACCAAGCG TATTCATCGG ATTGAAGGCA ATAAGGTATC CTTATATATG
GAAAATGTGA ACGGCGTGAA TGGACTAAAG GCAGTGGGTG ATGAACTGTA TATTGCCGGA
GGTAAAACGC TTTGGAAGGC TGATGCAAAT AAAAAACTGA CCAGGATAGC TGAACTGCCC
AATGGTGGCG ATGGTATAGA GCCGGTTGGG AATGGCGACT GGCTGTTTTC CTGCTGGGGT
GGTTATGTTT ATTATGTGCA TGCCGACGGC AAATACGAGC TGCTGCTGGA TCTTCACCTG
GAAAAAAAGA ATACGGCTGA TATCGGTTAT GATCCGGTTA ATCGTATCGT TTATATTCCT
ACGTTTTGGA AAAAGAGTGT AATGGCTTAT CAGTTAAAAT AA
 
Protein sequence
MKQYLVVIFM VTASLSLKAQ HSLEKLWETD SVINLPESVL PDIKAGILYA SVMGNNPNDK 
DGIGGVAKLS TTGKMIDHDW ITGLNSPKGL GRFGNTLYAA DLSDVVVIDM AKGKVKLKIP
VDSAKFLNDI TVSDKGIVYV SDSRTKRIHR IEGNKVSLYM ENVNGVNGLK AVGDELYIAG
GKTLWKADAN KKLTRIAELP NGGDGIEPVG NGDWLFSCWG GYVYYVHADG KYELLLDLHL
EKKNTADIGY DPVNRIVYIP TFWKKSVMAY QLK