Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0453 |
Symbol | |
ID | 8251538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 537788 |
End bp | 538609 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644934101 |
Product | periplasmic ATP/GTP-binding protein |
Protein accession | YP_003090739 |
Protein GI | 255530367 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.879062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACAAT ACCTTGTCGT TATTTTTATG GTTACTGCGT CACTGAGTTT GAAGGCCCAG CACAGCCTCG AAAAACTTTG GGAAACAGAC AGTGTGATCA ATTTACCAGA ATCTGTTTTG CCCGATATAA AAGCGGGTAT CCTGTATGCT TCTGTAATGG GCAATAATCC GAACGATAAG GACGGCATTG GTGGCGTTGC CAAGCTGAGT ACTACTGGTA AAATGATTGA TCATGACTGG ATCACCGGTT TAAATTCGCC AAAAGGACTG GGCAGGTTTG GGAATACCCT ATATGCTGCA GACCTGAGTG ATGTAGTGGT GATTGATATG GCGAAAGGAA AGGTAAAACT CAAAATACCG GTAGACAGTG CAAAATTTTT GAATGACATT ACAGTAAGTG ATAAGGGCAT TGTATATGTT TCTGATTCGA GGACCAAGCG TATTCATCGG ATTGAAGGCA ATAAGGTATC CTTATATATG GAAAATGTGA ACGGCGTGAA TGGACTAAAG GCAGTGGGTG ATGAACTGTA TATTGCCGGA GGTAAAACGC TTTGGAAGGC TGATGCAAAT AAAAAACTGA CCAGGATAGC TGAACTGCCC AATGGTGGCG ATGGTATAGA GCCGGTTGGG AATGGCGACT GGCTGTTTTC CTGCTGGGGT GGTTATGTTT ATTATGTGCA TGCCGACGGC AAATACGAGC TGCTGCTGGA TCTTCACCTG GAAAAAAAGA ATACGGCTGA TATCGGTTAT GATCCGGTTA ATCGTATCGT TTATATTCCT ACGTTTTGGA AAAAGAGTGT AATGGCTTAT CAGTTAAAAT AA
|
Protein sequence | MKQYLVVIFM VTASLSLKAQ HSLEKLWETD SVINLPESVL PDIKAGILYA SVMGNNPNDK DGIGGVAKLS TTGKMIDHDW ITGLNSPKGL GRFGNTLYAA DLSDVVVIDM AKGKVKLKIP VDSAKFLNDI TVSDKGIVYV SDSRTKRIHR IEGNKVSLYM ENVNGVNGLK AVGDELYIAG GKTLWKADAN KKLTRIAELP NGGDGIEPVG NGDWLFSCWG GYVYYVHADG KYELLLDLHL EKKNTADIGY DPVNRIVYIP TFWKKSVMAY QLK
|
| |