| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0430 |
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| Symbol | |
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| ID | 8251515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 502436 |
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| End bp | 503422 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644934078 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_003090716 |
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| Protein GI | 255530344 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1099] Predicted metal-dependent hydrolases with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.340827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.921802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCTGTA ATGAGAATTT TGAGGAGAGA AATAAAGGCG AAAAAATACA GACTTCGCTT
GACCTGAGCG AGATCAGCGG AATGAAGTTC TTTGATCCGC ATGTACACAT GACTTCACGT
ACTACCGATG ACTACCAGGC TATGGCCGAT GCGGGAATTG TTGCCCTGAT TGAACCGGCT
TTCTGGCTGG GGCAGCCGCG TACCCAGTTA GGCAGTTTTA CCGATTACTA TAGCAGCCTG
ATTGGCTGGG AACGGTTCAG GTCGTCCCAG TTTGGCATCA AGCATTATTG TACCATAGGC
TTAAATTCCC GTGAGGCCAA TAATGAGCAG CTGGCAGAAC AGGTGATGGA AATTTTACCA
CAGTTTATTT TTAAGGAAGG TGTGGTAGGT ATTGGTGAGA TTGGCTTTGA CGACCAGACT
GCAGCTGAAG AGAAATATTA CCGCTTACAG CTTGACCTGG CAAAAGAAGC GGGTTTGCCG
GTACAGATCC ATACGCCACA CCGCGATAAG AAAAAAGGTA CCCAGCGCAG TATGGATATT
GCCATAGAGC AGGGCCTTGA CCCTTATATG GTGATTGTAG ACCATAACAA TGAGGAGACC
GTAAAAGAGG TGTTGGACAG GGGCTTTTGG GCTGCTTTTA CCATTTATCC TTTTACCAAA
ATGGGGAATG AGCGCATGGT AGAGGTGCTG AAACAATATG GATCGGAAAG GATCATGATC
AATTCGGCGG CCGACTGGGG CATCAGTGAT CCGCTGGCCA TTCCTAAAAC TGCAGCCCTG
ATGAAAAGAT CGGGCATTAG CCTTCAGGAC ATTGAACTGG TTACCTACCG CAATGCCATT
ACAGCTTTTG CACAGAGCGG ACAGATTGAT GAGAATGACT TTTTAAGGGT GAAAAACATT
GACCAGAGCC AGAAGTTTGC CAGCAATTCC ATCTTACGTG GCGGGCAGCA ACCAAGAATA
GACAAAAACT CCATCATCAT TTCATAG
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| Protein sequence | MCCNENFEER NKGEKIQTSL DLSEISGMKF FDPHVHMTSR TTDDYQAMAD AGIVALIEPA
FWLGQPRTQL GSFTDYYSSL IGWERFRSSQ FGIKHYCTIG LNSREANNEQ LAEQVMEILP
QFIFKEGVVG IGEIGFDDQT AAEEKYYRLQ LDLAKEAGLP VQIHTPHRDK KKGTQRSMDI
AIEQGLDPYM VIVDHNNEET VKEVLDRGFW AAFTIYPFTK MGNERMVEVL KQYGSERIMI
NSAADWGISD PLAIPKTAAL MKRSGISLQD IELVTYRNAI TAFAQSGQID ENDFLRVKNI
DQSQKFASNS ILRGGQQPRI DKNSIIIS
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