| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0406 |
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| Symbol | gcvT |
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| ID | 8251491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 478257 |
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| End bp | 479336 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934054 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_003090692 |
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| Protein GI | 255530320 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.885714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.283909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATA CCGCACTAAC CAATAAACAC ATTTCTTTAG GCGCCAAAAT GGTGCCATTT
GCCGGGTACA ACATGCCTGT ACAATACGAA GGCATCAATG CAGAGCACGC TGCAGTGCGC
AACAGCGTTG GCGTTTTCGA CGTTAGCCAT ATGGGTGAAT TTATTCTGAA AGGTGAAAAT
GCTTTAGACC TGATCCAGCG TGTAACCAGT AACGATGCCT CAAAACTATA TGACGGTAAG
GTGCAGTATT CCTGCTTGCC AAATGAAAAT GGTGGTATTG TAGACGATCT GCTGGTTTAC
CGCATTGATG AACTTACTTA TATGCTTGTG GTGAATGCTT CAAACATTGA AAAAGACTGG
AACTGGATAC AAAAGTTCAA TACCAGAGGC GTGGAAATGC ATAATATATC TGATAAAACA
TCTTTATTGG CCATACAAGG GCCTAAAGCT GCCGAAGCCC TGCAAAGCTT AACAGATGTT
GACCTGGCAT CAATGGACTA CTACAATTTT GTAAAGGGCA AATTTGCAGG TGTTGATAAT
GTACTGATCT CCGCAACAGG GTATACCGGT GCCGGAGGCT TCGAGATCTA CTTTGACAAC
GAACACGCAG ATGCCATCTG GAATGCCATT TTTGAAGCGG GAAAACCATT TAACATCAAG
CCCATTGGCT TAGGTGCCAG AGACACCCTG CGCCTTGAAA TGGGTTTCTG TCTTTACGGA
AATGATATTG ACGACCATAC CTCCCCAATT GAAGCGGGAC TGGGATGGAT CACCAAATTC
TCTAAAATAT TTACCAATTC AGAAGCACTC CTTGCACAAA AAGAAGCCGG GGTGGCCAGA
AAGCTGGTTG GTTTTGAAAT GATCGACAGG GGTATACCAC GTCATGATTA CGAAATTGTT
GATGGAGAAG GTAATGTAAT CGGTAAAGTT ACTTCTGGTA CCCAATCGCC CTCCCTGCAA
AAAGCAATAG GAATGGGATA TATAGATAAA GCTTTTGCCA AAGAAGGAAC GGAGATCTTT
ATTCATATCC GTAGCCAAAA AATACTGGCA AAAATCGTAA AATTCCCTTT TTATAAATAA
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| Protein sequence | MKNTALTNKH ISLGAKMVPF AGYNMPVQYE GINAEHAAVR NSVGVFDVSH MGEFILKGEN
ALDLIQRVTS NDASKLYDGK VQYSCLPNEN GGIVDDLLVY RIDELTYMLV VNASNIEKDW
NWIQKFNTRG VEMHNISDKT SLLAIQGPKA AEALQSLTDV DLASMDYYNF VKGKFAGVDN
VLISATGYTG AGGFEIYFDN EHADAIWNAI FEAGKPFNIK PIGLGARDTL RLEMGFCLYG
NDIDDHTSPI EAGLGWITKF SKIFTNSEAL LAQKEAGVAR KLVGFEMIDR GIPRHDYEIV
DGEGNVIGKV TSGTQSPSLQ KAIGMGYIDK AFAKEGTEIF IHIRSQKILA KIVKFPFYK
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