Gene Phep_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0401 
Symbol 
ID8251486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp473172 
End bp474149 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content36% 
IMG OID644934049 
Producthypothetical protein 
Protein accessionYP_003090687 
Protein GI255530315 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.275015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACATCCA ATTATAAAAA GACATTATCA TACTTTCTTA AAACCGCAAT TGTAATCATT 
GCATTTTGGT TTGTATACAA AAAACTGTCT TCCAATGAAA ACTTACGTGC TTTTGAAGAT
CTTTTAAAAC AGATTCCCCA AACTGAAATT ATCCTTATCC TTGGTATAGT TTGTTTATTG
ATGCTGGTTA ACTGGGGTGT CGAAGCATTA AAATGGAAAA GATTAATAGC CCGTATTGAA
AGTATTAGTT TATGGCGGGC TATTGAATCT GTTTTTTGCG GACTAACCTG GGCTGTATTT
ACGCCTAATC GCATTGGCGA GTATGGGGGC AGAGTATTTT TCCTTTCGCC TAAACGGCGC
ATTATAGGTG TTGTAGCCAT GGCCGTTGGA AATATTGGCC AGATGGTGCT GACAAATGTT
TTTGGAGCAA TAGCGATAAG CATATTTATT TATCGGTTTG TTCCGCTTGA TTACAGACTG
TTCTATGCTT TAATCGTGCT TTCTGCAATG TTCTGTGCTT TTTTTATGGT GTTTTACTTT
AACATCAAAT GGCTGAACGG GATTTTGCTT TCCATGCGGT TTACGCGCAA ATACAAGAAA
TTTTATAGCA TTCTGGCCAG GTATAGTAAA AAAGAACTGC TGTATATCCT GTTGTTTTGC
CTGGCAAGAT ATTTTGTATT CAGCTCACAG TATTTTATTC TTTTCTTCTG GCTGATACCC
GGAATCCATC CTCTGGATAT TTTAACAATG GTATGTATAT TATTTTTTGT CCAATCTACA
CTCCCTTCTC TCGATTTGTT TGATATAGGC GTAAGGAGTT ATACCGCTGC TTATTTCTTT
AGTTTTGTTA CCGATCATGA TGTAGCTGTT ATTGCATGCA CAGCAAGTAT ATGGCTGATA
AATATTATAA TTCCTGCTAT ATTAGGCTCT TATTTTGTGT TTAAACTTAA TTTTTTTGGA
AATACTCAAC GCAATTAG
 
Protein sequence
MTSNYKKTLS YFLKTAIVII AFWFVYKKLS SNENLRAFED LLKQIPQTEI ILILGIVCLL 
MLVNWGVEAL KWKRLIARIE SISLWRAIES VFCGLTWAVF TPNRIGEYGG RVFFLSPKRR
IIGVVAMAVG NIGQMVLTNV FGAIAISIFI YRFVPLDYRL FYALIVLSAM FCAFFMVFYF
NIKWLNGILL SMRFTRKYKK FYSILARYSK KELLYILLFC LARYFVFSSQ YFILFFWLIP
GIHPLDILTM VCILFFVQST LPSLDLFDIG VRSYTAAYFF SFVTDHDVAV IACTASIWLI
NIIIPAILGS YFVFKLNFFG NTQRN