Gene Phep_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0324 
Symbol 
ID8251409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand+ 
Start bp373300 
End bp373962 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content39% 
IMG OID644933972 
Producthypothetical protein 
Protein accessionYP_003090610 
Protein GI255530238 
COG category[S] Function unknown 
COG ID[COG5587] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02453] conserved hypothetical protein TIGR02453 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGC AAGAAACACT CGCTTTTATA ACCGACGTAG CCCAGAATAA CAACCGGGAA 
TGGTTTGCTG AGCACAAAGA AAGATATGAA GTTGCCAAAG CTGATGTGCT GTCTTTTGTT 
GAGCAGCTCA TACCGAGGCT GGCGGCAGTA GATCCAGCTT TTTCTATAGA TACCCCTGCT 
AAAAAATGTT TACTGCGCAT TTACAGGGAT GTGCGTTTCA GCAAAAATAA GGATCCCTAT 
AAAAATAACT TTGGGATTTC ATTTAACGTT AAAGGCAATG ATATACATGG TCCGGGTTAT 
TACCTGCACA TACAGCCTGG CGAATGTTTT TTTGCTGCCG GATTTTGGAT GCCGGAAGCT 
GCTATCCTGA AAAAGATAAG AGAAGAAATT GATTACAATG CTACCGAGTT TCTGGACATC 
ATCAATGACA AAAGCTTTCA AAGTATCTAT CACCTAAGCA AAGAGGATAC CCTTAAAAAT 
GCACCTAAAG GCTATGAAAC AGATCATCCC CAAATCGAAT TTTTACGGTT GAAGAGCTTT 
ATCGCGATTT ACCCTTTAAA AGATGAAGAC TTTTTAAAAC CGGGAATCGT TGATAAGTTG 
AAAACTGCTT TTGAAAGTGT TTATCCATTT CTCTTATTTT TGAGGAAAGC TGTTGACCAG 
TAA
 
Protein sequence
MIKQETLAFI TDVAQNNNRE WFAEHKERYE VAKADVLSFV EQLIPRLAAV DPAFSIDTPA 
KKCLLRIYRD VRFSKNKDPY KNNFGISFNV KGNDIHGPGY YLHIQPGECF FAAGFWMPEA 
AILKKIREEI DYNATEFLDI INDKSFQSIY HLSKEDTLKN APKGYETDHP QIEFLRLKSF 
IAIYPLKDED FLKPGIVDKL KTAFESVYPF LLFLRKAVDQ