Gene Phep_0264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0264 
Symbol 
ID8251349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp310346 
End bp311473 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content44% 
IMG OID644933914 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003090552 
Protein GI255530180 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TCGTTCTGAT CGCAGCCTGC CTGTTGCCAG TAGCTGTTAT GGCGCAGGAA 
AAGTTTACAA TAAATGGCAA GGTAGGTAAT CTGGGAGCCC CTGCAAAAGC CTATTTATAT
TATGGCCCCC GTGCTAACCC TGTTGTAGAT TCTGCAGCAA TTGTTGGCGG TAAATTTATG
TTTACCGGCC CAATATCCGG AATAACGCAG GCTACTGTGG TCATCAGACA CGACCTGGCA
GCGCCCTCGC GTACCGTCGC CCCTGATGGT TATGCTTTGT TTCTTGAACC TAAAGTACTG
GAGCTGGTAT CGGCTACCGA TTCAATAAAA CACGCTGTGG TTAAAGGCTC AAAAGTAAAT
GATGACAATG CAAAGTTTAA AGCGCTGACC AAATCCGTAA ACGAAAAGAA CGCTGCTTTG
ATGGCCGAAT ACCGTAGTAA AACGGAAACC GAGCGTAATG ATGAAGCCTA TATGAAAACA
GTGATGAGCC GTGACGAGGC CAACAGAAAA GAGATGGAAA CGCTGAGCAA GCAATTCTAC
ACTGCAAACC GGGATTCTTA TATTGGTCTG CTTGCTTTTC AGGGGACTGT TAATGTGGAT
AAGGACCTTA GCGGGGCAGA AGCAGAGCTC AATAAATTTT CTCCTGCTAT AAAAGCTACA
GAGCTTGGTA AAAGTATAGC AAAGACTATC CAGTCGGCAA AAAGTACGGG TGTTGGACAA
ATGGCAATGG ATTTTACACA GAATGATGTG AATGATAAGC CGGTTAAATT GTCTGATTTC
CGTGGAAAAT ATGTATTGGT AGATTTCTGG GCTTCATGGT GCGGACCATG CCGTGCGGAA
AATCCTAACG TGGTAAAAGC TTATACAACT TATAAAGACA AGAATTTTAC AGTTTTGGGT
GTTTCTTTAG ATCAGCCTGG TAAAAAGGAT GCCTGGCTGC AAGCGATTGA GAAAGATGGC
TTAAACTGGA CTCAGTTGTC AGATTTAAAA GGATGGAGCA ATGAGGTCGC TGTTCAATAT
GGTGTTCGGT CTATCCCTGC AAATTACCTG ATTGACCCTA GCGGGAAGAT CATTGCTAAG
AATGTAAGGG GTGAAGAGCT GCAGAAAAAA CTTGCAGAGG TATTGTAA
 
Protein sequence
MKKIVLIAAC LLPVAVMAQE KFTINGKVGN LGAPAKAYLY YGPRANPVVD SAAIVGGKFM 
FTGPISGITQ ATVVIRHDLA APSRTVAPDG YALFLEPKVL ELVSATDSIK HAVVKGSKVN
DDNAKFKALT KSVNEKNAAL MAEYRSKTET ERNDEAYMKT VMSRDEANRK EMETLSKQFY
TANRDSYIGL LAFQGTVNVD KDLSGAEAEL NKFSPAIKAT ELGKSIAKTI QSAKSTGVGQ
MAMDFTQNDV NDKPVKLSDF RGKYVLVDFW ASWCGPCRAE NPNVVKAYTT YKDKNFTVLG
VSLDQPGKKD AWLQAIEKDG LNWTQLSDLK GWSNEVAVQY GVRSIPANYL IDPSGKIIAK
NVRGEELQKK LAEVL