Gene Phep_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0263 
Symbol 
ID8251348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp309069 
End bp310250 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content46% 
IMG OID644933913 
ProductArginase/agmatinase/formiminoglutamase 
Protein accessionYP_003090551 
Protein GI255530179 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTAT CAGATTTTTT TTCTCCGGTC AGTCCTGACA AATTTACGCC AAAACAGGGA 
TTTTATACCA GTCAGCTAGG TTTAAAGGCA GGGTTTTTTA CCGATAAATT TCCAGACCTG
GAAGACAAAC AATATGACAT TGCAATTTTT GGGGTGCAGG ACGACCGCGC TGCGGTAAAC
AATGAGGGCT GTGCACTTGC ACCTGATTAT TTCAGGAGCC AGTTTTACGG CTTAAACGAA
GGACCGTTTA CGTCCAGGAT CATTGATCTT GGAAATATCA GGGCCGGGGC CTCCATTTCA
GATACCTACG TGGCAGTAAA GACTGTAGTA GCTGAGCTGA TTAAACTTGA CATTCTGCCG
GTAATTATCG GCGGGGGGCA AGACCTTACG TACGCCCAGT ACCTGGCTTA TGAGCACCTG
GAACAAAAGG TAGATCTGGT GGTGGTAGAT AGCAAATTCG ACCTGGATGA GGAAGATCAG
GAAGGATTAA CTGCCAAATC AGATACTTAT TTAAACAAAA TCCTGTTACA TCAGCCCAAT
TACCTTTTCA ATTTCAGCAA TATTGGTTAC CAAACCTATT TTGTAAACCA GGATAGCCTG
AAGGTGATGA GCAAACTTTA TTTTGATGCC CATCGTTTGG GTGAGTTTGC CAGTGACATC
ACTTTAACCG AGCCGATCAT CCGCAATGCC AGCATGATCA GTTTTGACAT CGGTGCCATC
CGCTCTTCAG ATGCCGGCGC AAATGCCAAT GCCAGCCCAA ATGGTTTTTA CGGCGAACAG
GCCTGCGCCA TTAGTCGTTA TGCGGGCATG AGCGATAAGC TGACTTCAAT AGGTTTCTAT
GAATTTAATC CGGCATTTGA TCAGAACGGA CAAACGGCCA TGCTCCTGGC TCAAATGGTC
TGGTATTTTG TAGATGGCTA TTATAACCGT AAAAAGGATT TTCCGCTGAG CCCGAAATCA
CAATACCTGA TTTACAGGGC CAGCTTAAAC GATGGCTCTG CAGAAATGCT CTTTGTGAAA
AGCAAAAAAT CAGACCGCTG GTGGATGCAG GTGCCCTATC CTGCGGGAAT TTCCAAAAAT
GAACGTTACC ACCTGGTGCC TTGCCGTTAC GACGACTATA CTACGGCTGT GAATGGGGAA
ATGCCCGATC TGTGGTGGCG GACCTTTCAA AAGCTACTAT AA
 
Protein sequence
MSLSDFFSPV SPDKFTPKQG FYTSQLGLKA GFFTDKFPDL EDKQYDIAIF GVQDDRAAVN 
NEGCALAPDY FRSQFYGLNE GPFTSRIIDL GNIRAGASIS DTYVAVKTVV AELIKLDILP
VIIGGGQDLT YAQYLAYEHL EQKVDLVVVD SKFDLDEEDQ EGLTAKSDTY LNKILLHQPN
YLFNFSNIGY QTYFVNQDSL KVMSKLYFDA HRLGEFASDI TLTEPIIRNA SMISFDIGAI
RSSDAGANAN ASPNGFYGEQ ACAISRYAGM SDKLTSIGFY EFNPAFDQNG QTAMLLAQMV
WYFVDGYYNR KKDFPLSPKS QYLIYRASLN DGSAEMLFVK SKKSDRWWMQ VPYPAGISKN
ERYHLVPCRY DDYTTAVNGE MPDLWWRTFQ KLL