Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0240 |
Symbol | |
ID | 8251325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 278814 |
End bp | 279470 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644933890 |
Product | MgtC/SapB transporter |
Protein accession | YP_003090528 |
Protein GI | 255530156 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.127805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAACA TTCTTGACAG CAACCACTTC CTTACACAAA GTGAGGTAAA CAAGTTTTTA ATGGCTACCC TGCTTTGTGG CCTTATTGGC GCAGAACGGG AATTCCGAAG CAAACAGGCG GGGTTAAAAA CCATGATCAT GATTGGCCTG GGTTCTACTC TTTTTACCAT CCTGTCCATT AAAATAGGTT TAAGCAGTCA CGACCGCATC GCTTCCAATA TTGTTACCGG AATTGGTTTT CTGGGTGCCG GTGTTATCTT TAAAGAGGAC AACCAGGTCA AAGGCCTTAC TACCGCCTGC GTCATCTGGA TAGTTGCCGC CATTGGTATG GCCATAGGTT CGGGCTTTTA TGAACAGGCC GTAGGCGTAA CACTGGTTGT ACTGCTCGCT TTACTCATCT TCCCTTTTCT GGAAGAAATG GCCGAACGCC GCTTCACCAA AAGGATATAC CGCATTGTAA AACGCTATGA AGGCGAAAGT CTGGAAAAGT ATGAAGAAGA CATCAAGACC TCTAAGCTAA AGCTATCCCG GGGAAAACAA GAACTCGCAA ACGGCATCAT TAGCGGTACA TGGATCGCCA TTGGCAGTCC CAAAAACCAT AAAACCTTTG TAGACCGAAT GCTTCAGGAC AAAAATATCA TTGCTTTTGA TTTTTAG
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Protein sequence | MENILDSNHF LTQSEVNKFL MATLLCGLIG AEREFRSKQA GLKTMIMIGL GSTLFTILSI KIGLSSHDRI ASNIVTGIGF LGAGVIFKED NQVKGLTTAC VIWIVAAIGM AIGSGFYEQA VGVTLVVLLA LLIFPFLEEM AERRFTKRIY RIVKRYEGES LEKYEEDIKT SKLKLSRGKQ ELANGIISGT WIAIGSPKNH KTFVDRMLQD KNIIAFDF
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