Gene Phep_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0240 
Symbol 
ID8251325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp278814 
End bp279470 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content45% 
IMG OID644933890 
ProductMgtC/SapB transporter 
Protein accessionYP_003090528 
Protein GI255530156 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.127805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAACA TTCTTGACAG CAACCACTTC CTTACACAAA GTGAGGTAAA CAAGTTTTTA 
ATGGCTACCC TGCTTTGTGG CCTTATTGGC GCAGAACGGG AATTCCGAAG CAAACAGGCG
GGGTTAAAAA CCATGATCAT GATTGGCCTG GGTTCTACTC TTTTTACCAT CCTGTCCATT
AAAATAGGTT TAAGCAGTCA CGACCGCATC GCTTCCAATA TTGTTACCGG AATTGGTTTT
CTGGGTGCCG GTGTTATCTT TAAAGAGGAC AACCAGGTCA AAGGCCTTAC TACCGCCTGC
GTCATCTGGA TAGTTGCCGC CATTGGTATG GCCATAGGTT CGGGCTTTTA TGAACAGGCC
GTAGGCGTAA CACTGGTTGT ACTGCTCGCT TTACTCATCT TCCCTTTTCT GGAAGAAATG
GCCGAACGCC GCTTCACCAA AAGGATATAC CGCATTGTAA AACGCTATGA AGGCGAAAGT
CTGGAAAAGT ATGAAGAAGA CATCAAGACC TCTAAGCTAA AGCTATCCCG GGGAAAACAA
GAACTCGCAA ACGGCATCAT TAGCGGTACA TGGATCGCCA TTGGCAGTCC CAAAAACCAT
AAAACCTTTG TAGACCGAAT GCTTCAGGAC AAAAATATCA TTGCTTTTGA TTTTTAG
 
Protein sequence
MENILDSNHF LTQSEVNKFL MATLLCGLIG AEREFRSKQA GLKTMIMIGL GSTLFTILSI 
KIGLSSHDRI ASNIVTGIGF LGAGVIFKED NQVKGLTTAC VIWIVAAIGM AIGSGFYEQA
VGVTLVVLLA LLIFPFLEEM AERRFTKRIY RIVKRYEGES LEKYEEDIKT SKLKLSRGKQ
ELANGIISGT WIAIGSPKNH KTFVDRMLQD KNIIAFDF