Gene Phep_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0197 
Symbol 
ID8251282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp227985 
End bp228353 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content42% 
IMG OID644933847 
Producthypothetical protein 
Protein accessionYP_003090485 
Protein GI255530113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.235758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATAA AAGGAAAAGT GCATGAAATT GGTGCATTAC AGCAGGTGAG TGAAACTTTT 
AAAAAAAGAG ACCTGATTAT AGAGTATGCA GAAAACCCAA CTTATCCTGA ATACATCAGG
TTTGAGGCTT TACAAGATAA AACCGCTTTA TTTGACAGCT TAAAACAAGG CGATGATGTT
GAGGTTTCAT TCAATTTACG CGGACGTCCA TGGACGGATA AAACCGGCAA AACTTCTTAC
TTTAACAGTT TGGTAGTATG GCGTATCAAC GCACTTACAA ACAGTGCAGC GGCAGCAACT
ACTCCAGCAT ATGCACCTCC GGCCGATCTG AACAGCGCAC CGGGCGAGGA AGATGATCTT
CCTTTTTAA
 
Protein sequence
MEIKGKVHEI GALQQVSETF KKRDLIIEYA ENPTYPEYIR FEALQDKTAL FDSLKQGDDV 
EVSFNLRGRP WTDKTGKTSY FNSLVVWRIN ALTNSAAAAT TPAYAPPADL NSAPGEEDDL
PF