Gene Phep_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0118 
Symbol 
ID8251203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp140581 
End bp141858 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content46% 
IMG OID644933768 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003090406 
Protein GI255530034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGATC ATACAGTCAT AACAGAAAAG CCCGACCTTT ACGCAGCCTT ACGGCTCAAA 
GAATTCAGAT ATTATATGGG TATGCGGTTC TTCTTTACGT TTGGCTATCA GATGCAGGCC
GTTATCATCG GATTCCATAT TTATCATTTG ACAAAAGATC CGCTGGCCCT GGGCCTGGTA
GGCCTTTGTG AGGCCATTCC ATCTATTGGC ATTGCCTTGT ATGGAGGCTA TGTAGCCGAT
AAATCTGAGA AAAGGGGCTT GCTCATGAAA ATTTTCATTA CCGTATTCCT TTGTTCCTTT
GTAATGATGC TGGTTACCAT TCCGCAAATG CACGCGTATG TGCCGGCAAA TTATGTGGTG
CCAGTCATGT ACCTGATGAT CTTTGGGATT GGCATAGCCA GGGGCTTTTA CAGTCCGGCT
GCTTTTTCTG TAATGGGACA GGTTGTGCCT AAGGCGCTAT ACCCCAATTC CAGTACATGG
AACAGCTCGG CCTATATGAC CGCTTCAATT CTGGGCCCTG CGGTAGGTGG GCTGATTTAT
GCTTTCTTTG GTGTAACTGT CACTTATGCC GTTATCATTG CCTTCATCCT TGTTGCACTC
TGCTTCATTT TCCTTTTAAA ACCAATCCCG GCTAGGTTCA TCCCTAAAGA AAACATTGTC
AAAAGTCTTA CAGAAGGTGT AAAATTTGTA TTTAAAAACA AAATGATGCT GGGCGCCATG
AGCCTTGACC TTTTTTCTGT TTTTTTTGGC GGAGCCGTTG CGCTGCTGCC GGTTTTTGCG
AACGATATTC TCAAAGTGGG GTCTGAAGGA CTGGGTTTTA TGCGGGCTGC TGCATCTGCG
GGGGCGGTGA TTACCATGCT GGCCATGACC CGCTTTTCAC CTATGAACAA GCCCTGGAGA
AATCTGCTTA TCGCGGTAAC CGGCTTTGGC ACGAGCATCA TTTGTTATGG CATTTCTAAA
AACTTTTACC TTACCTTATT CTTTTTGTTT ATGGAAGGAG CCTTTGACAG TGTGAGTGTC
CTTATCCGTT CTACCATCAT GCAGTTGCTT ACACCCGATG AGATGCGGGG CAGGGTATCG
GCAGTGAACA GCATGTTTAT CGGCTCTTCT AATGAAATAG GAGCCTTTGA ATCGGGTTTA
ACGGCCAAAC TGATGCGGAC TGTTCCGGCA GTGGTATTTG GAGGCAGCAT GACCATAGTG
GTAGCCGGAC TTACTTACTT AAAAACAAAA AACCTGCTCA GGTTAAGCCT TAATGAAATT
AACGAACAAA GGGCTTAA
 
Protein sequence
MDDHTVITEK PDLYAALRLK EFRYYMGMRF FFTFGYQMQA VIIGFHIYHL TKDPLALGLV 
GLCEAIPSIG IALYGGYVAD KSEKRGLLMK IFITVFLCSF VMMLVTIPQM HAYVPANYVV
PVMYLMIFGI GIARGFYSPA AFSVMGQVVP KALYPNSSTW NSSAYMTASI LGPAVGGLIY
AFFGVTVTYA VIIAFILVAL CFIFLLKPIP ARFIPKENIV KSLTEGVKFV FKNKMMLGAM
SLDLFSVFFG GAVALLPVFA NDILKVGSEG LGFMRAAASA GAVITMLAMT RFSPMNKPWR
NLLIAVTGFG TSIICYGISK NFYLTLFFLF MEGAFDSVSV LIRSTIMQLL TPDEMRGRVS
AVNSMFIGSS NEIGAFESGL TAKLMRTVPA VVFGGSMTIV VAGLTYLKTK NLLRLSLNEI
NEQRA