| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0103 |
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| Symbol | |
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| ID | 8251188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 111829 |
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| End bp | 113226 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644933753 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_003090391 |
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| Protein GI | 255530019 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.623243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTG CTTTTCATGG TGCCGCGCGT GCGGTAACCG GCAGTAAACA CCTCATTACC
CTGGACAAGG GTGTGCAAAT ACTGCTGGAT TGTGGGCTGT TTCAGGGCAT GGGAGACCTG
ACCGACGGCC TGAACGAATC TTTTGGTTTT AACCCGGCAA AGGTAACCTA TATGATCCTG
TCGCATGCCC ATATAGACCA TTGTGGTTTA CTGCCCCGTC TGGTAGCAGA GGGTTTTCGT
GGCCCGGTAT ATTGTACTCC GGCCACCAGA AACCTGGCCC GGATTTTACT ACTCGATTCG
GCAAAGATCC AGATGCAGGA TGCTGAATAC GCCAACAAGA AGATCCGGCG TGTGGAAGAT
CAGGAAATGC CTTTATATAC CGACAAGGAT GTAGAACAAA CCCTTAGCCA GTTTAAAACC
ATACCTTACG ATCAGGACTT TAACATAGAT CCGGACGTTA CCCTAAGGTT TACGGATGCC
GGACACATTG TTGGCAGCGC TGCCGTTCAT TTACAGCTCC ATGAAAACGG GACAACAACC
CGTATTACCT TTAGCGGCGA TGTTGGACGT TATGGCGACC TGCTGCTTAA AAGTCCGCAA
ACCTTTCCCC AGGCAGATTA TATCCTGATG GAATCTACCT ATGGCGATTC TTTGCATGCC
GACCTGGACC CGATAGAAGA TATGCTGCTG CAGGTGATTA CCCGTACCTG TATAGAAAAA
AAAGGAAAAG TGATCATCCC GGCCTTTAGT GTTGGCCGTA CCCAGGAACT TTTATATGCC
CTGAACGGCC TGGAGCTAAA AAATAAACTG CCCGAAATAC CTTATTATGT AGACAGTCCG
CTTTCTATGG AAGCTACGGA AGTATTAAGG AGCCACCCCG AGGTTTACAA CAACGGGGTA
AAAGAGATCC TGAAGGTTGA TCAGGATATT TTTGGCTTTA AAGGTCTGCG CTTCATAGAA
AGTGTGGAAG AATCCAAAGC CCTAAACGTC GACATGCATC CTTGTGTGAT CATTTCTTCC
TCAGGAATGG CCGAAGGTGG CAGGGTCAGG CACCACATCA GGAACAACAT CAGCGACAAG
AAAAACACCA TTTTAATGGT GGGTTATGCC AGCCCGGACT CGCTAGCGGG CAGGTTAATG
GCCGGACAGA AAAGGGTTTG GCTATTTGGG CAGGAATATG ATGTTATTGC CGAAGTGGGG
GCCATTAAAT CTATGAGCGC GCATGGAGAT TATGAAGACC TGCTGCAATT CCTGTCTGTT
CAGGATCCTG CAAAGGTTAA ACGCCTGTTC CTGGTACATG GAGAATATGA AGTACAGCAA
AAATTTGCAC AACGGATCAT AAATGCGGGC TTTAAAAATG TATCCATTCC GGAATACCAT
CAGGAATTTG AGCTGTAA
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| Protein sequence | MKIAFHGAAR AVTGSKHLIT LDKGVQILLD CGLFQGMGDL TDGLNESFGF NPAKVTYMIL
SHAHIDHCGL LPRLVAEGFR GPVYCTPATR NLARILLLDS AKIQMQDAEY ANKKIRRVED
QEMPLYTDKD VEQTLSQFKT IPYDQDFNID PDVTLRFTDA GHIVGSAAVH LQLHENGTTT
RITFSGDVGR YGDLLLKSPQ TFPQADYILM ESTYGDSLHA DLDPIEDMLL QVITRTCIEK
KGKVIIPAFS VGRTQELLYA LNGLELKNKL PEIPYYVDSP LSMEATEVLR SHPEVYNNGV
KEILKVDQDI FGFKGLRFIE SVEESKALNV DMHPCVIISS SGMAEGGRVR HHIRNNISDK
KNTILMVGYA SPDSLAGRLM AGQKRVWLFG QEYDVIAEVG AIKSMSAHGD YEDLLQFLSV
QDPAKVKRLF LVHGEYEVQQ KFAQRIINAG FKNVSIPEYH QEFEL
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