Gene Pfl01_5697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5697 
Symbol 
ID3713689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6383540 
End bp6385753 
Gene Length2214 bp 
Protein Length737 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351424 
Protein GI77461917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.405224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAA CAAATTTTCT TATTGGTCGT GGCGAGCTCC TGACTCGGGA CATAAAAGGC 
CCAAAAAGAA AGATGGACAA GGCAATTGCC TATACGCTCA GACGTGCCCG CGAGCGTCTT
ACAGGCCAGG CGCAGGTGGC TTCAGTGTCG CTGAACGAGC TTCCGCCAAT TGCTTGTCCC
CATGATTTTG GCGTAGCTCG CCTGGTTCTG AACCCGAGCT ATATCGCTCG TTCCTATTTT
CCAACCGACC TCTTGCGCGC CACTGGGCTG GAGTCAATCG GGAGTAGACG CATCCGGGTT
ACCCCAGAAA GCTGGACGCG CACGATCGAA CCCCATGAGT GCGCGACTAC CGAAATATTC
GTTGCAGGCA AACGCAGTGC CTTCCGTGCG CTGAGCCATT GGATGGATGA GGTAGAGGAA
GAGTCCGACG AAGCGGACGA CCTCACTCAT ATAGAGAACA TCTTTGCGTT TGAGCCGAAT
GAACGCATCG TTGATCCCGG AACTGCAAAC GACAAATATT ATGAATTTGG CATCCACCTG
CTGCCCGATC AGGACAGCTC CTTCATTCAG CAGGCGTTTA TCGACTTCGC TGCCAAGTTT
GAACTGATCG TCCATAGCGA ATTGAGCTTC GAGGTGGGCA ATCTCTGGTT CGTACCTGTC
GAGGGCGAGC AAAGTCATGC GCTGCAACTG GCACAGTTCG TTTTCGTTCG CGTGATCCGC
CCCGTACCAA AGATGCGAGG CCTTCTGCCC TCCACTCGAA GGAGCGGCCC CTCGGTAAGC
TGCACTCTGC CAACTCAAGC ACCTCTTTCG GCAGATCCGA GAGTAGCCAT TCTCGATGCT
GGTCTGCCGG CAGACCACAC CATTGGAAAA TGGCTACGAA ATTATCGTGT ACTGGATGAA
CACGCCGGTG ATGATCCACT GGGCCCAGAA CACGGACTGG CAGCTACTTC AGCGTTTTTG
TTTGGCCCTA TTGAGCCCGA AGGCACCGCA GCACGCCCAT ACTCCTATGT CGACCATCTA
CGCGTGCTCG ATGAAGGGGC AAGTCTTGAG CATCCATTGC AGCTCTATCG CACACTGGGT
CATATCGAAG AGGTGCTGCT TTCGCGCCAA TACGAATTCA TCAATCTCAG CGTGGGCCCC
GACGTCGCCA TCGAAGATAA CGACGTGCAC GCCTGGACAT CGGTGATTGA TGACCTGCTC
AGTGATGGCA ATACGTTCAT GACCATCGCG GCGGGGAACA ATGGAACACG GGACTCCATC
GTTCAGCTGG ATCGTGTACA GGTACCTTCT GACTGCGTAA ACGCAATCAC CGTGGGTGCA
GCAAACTGCA CCAGCGCCGC TTGGGCGCGC GCGCCTTACA GCGCTCGGGG CCCAGGTCGA
AGCCCAGGCG TTATCAAGCC TGACCTCATG GCGTTCGGCG GCGGCAAACA GTACTTCCAC
GCGCTGGCTC CTGGTTCCAA ACCCTCACTG ACACCGCTGC TAGGCACCAG TTTTGCTGCG
CCCTACATCC TGCGCAGTGC GGTGGGTGTT CGTGCCGTAC TAGGGCAAGA GCTGTCTGCA
CTGGCTATTA AAGCCTTGCT GGTGCATTCC GCCCAAATGA ATGGGCATGA ACCCATCAAT
GTGGGTTGGG GCAAGGTTCC AGAAGACTTG ATGGAAGTCA TTACTTGCCC ACCAGGCGTT
GCGCGAATCG TTTACCAAGG CGAGTTGAGA CCCGGCAAAT ACATCTGCGC CCCCATTCCA
CTTCCCGATG ATGCTCTGAA AGGTATGGTG ACCTTGAAGG CCACTTTTTC CTTCGCCAGC
AGCACTGACC CCCAAGACTC CGCGTCCTAC ACTCGAGCAG GCTTGGAGGT GACTTTCAGG
CCCAATAAAG ACAAGGTTAA AGAGGGTAAA ACCAGCGCCT CTACCAAGTC GTTTTTCGAG
AAGAAGAAAT TTGCCACCGA GGAAGAGCGA CGCTCTGACT CCGGCAAATG GGAGACGGTT
TTACATGACT CCAAGAGAAT GCGCGGCTCG ACGCTCAACA ACGCGACATT CGATATTCAT
TACAACGCGC GCGAAAAGGG TGGCAATGCC GGTAAAGCCG AGAAGATCAA ATATGCGCTG
ATCATCACTG TGGAAGCGCC TAAGCACCCG GATCTCTATA CGGACATTCT GAAGGCGTAT
GCCGATACCT TGGTGCCGAT TGAACCACAG GTTTCGCTGC CTATCCGGGT ATAA
 
Protein sequence
MSQTNFLIGR GELLTRDIKG PKRKMDKAIA YTLRRARERL TGQAQVASVS LNELPPIACP 
HDFGVARLVL NPSYIARSYF PTDLLRATGL ESIGSRRIRV TPESWTRTIE PHECATTEIF
VAGKRSAFRA LSHWMDEVEE ESDEADDLTH IENIFAFEPN ERIVDPGTAN DKYYEFGIHL
LPDQDSSFIQ QAFIDFAAKF ELIVHSELSF EVGNLWFVPV EGEQSHALQL AQFVFVRVIR
PVPKMRGLLP STRRSGPSVS CTLPTQAPLS ADPRVAILDA GLPADHTIGK WLRNYRVLDE
HAGDDPLGPE HGLAATSAFL FGPIEPEGTA ARPYSYVDHL RVLDEGASLE HPLQLYRTLG
HIEEVLLSRQ YEFINLSVGP DVAIEDNDVH AWTSVIDDLL SDGNTFMTIA AGNNGTRDSI
VQLDRVQVPS DCVNAITVGA ANCTSAAWAR APYSARGPGR SPGVIKPDLM AFGGGKQYFH
ALAPGSKPSL TPLLGTSFAA PYILRSAVGV RAVLGQELSA LAIKALLVHS AQMNGHEPIN
VGWGKVPEDL MEVITCPPGV ARIVYQGELR PGKYICAPIP LPDDALKGMV TLKATFSFAS
STDPQDSASY TRAGLEVTFR PNKDKVKEGK TSASTKSFFE KKKFATEEER RSDSGKWETV
LHDSKRMRGS TLNNATFDIH YNAREKGGNA GKAEKIKYAL IITVEAPKHP DLYTDILKAY
ADTLVPIEPQ VSLPIRV