Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5697 |
Symbol | |
ID | 3713689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6383540 |
End bp | 6385753 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_351424 |
Protein GI | 77461917 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.405224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCAAA CAAATTTTCT TATTGGTCGT GGCGAGCTCC TGACTCGGGA CATAAAAGGC CCAAAAAGAA AGATGGACAA GGCAATTGCC TATACGCTCA GACGTGCCCG CGAGCGTCTT ACAGGCCAGG CGCAGGTGGC TTCAGTGTCG CTGAACGAGC TTCCGCCAAT TGCTTGTCCC CATGATTTTG GCGTAGCTCG CCTGGTTCTG AACCCGAGCT ATATCGCTCG TTCCTATTTT CCAACCGACC TCTTGCGCGC CACTGGGCTG GAGTCAATCG GGAGTAGACG CATCCGGGTT ACCCCAGAAA GCTGGACGCG CACGATCGAA CCCCATGAGT GCGCGACTAC CGAAATATTC GTTGCAGGCA AACGCAGTGC CTTCCGTGCG CTGAGCCATT GGATGGATGA GGTAGAGGAA GAGTCCGACG AAGCGGACGA CCTCACTCAT ATAGAGAACA TCTTTGCGTT TGAGCCGAAT GAACGCATCG TTGATCCCGG AACTGCAAAC GACAAATATT ATGAATTTGG CATCCACCTG CTGCCCGATC AGGACAGCTC CTTCATTCAG CAGGCGTTTA TCGACTTCGC TGCCAAGTTT GAACTGATCG TCCATAGCGA ATTGAGCTTC GAGGTGGGCA ATCTCTGGTT CGTACCTGTC GAGGGCGAGC AAAGTCATGC GCTGCAACTG GCACAGTTCG TTTTCGTTCG CGTGATCCGC CCCGTACCAA AGATGCGAGG CCTTCTGCCC TCCACTCGAA GGAGCGGCCC CTCGGTAAGC TGCACTCTGC CAACTCAAGC ACCTCTTTCG GCAGATCCGA GAGTAGCCAT TCTCGATGCT GGTCTGCCGG CAGACCACAC CATTGGAAAA TGGCTACGAA ATTATCGTGT ACTGGATGAA CACGCCGGTG ATGATCCACT GGGCCCAGAA CACGGACTGG CAGCTACTTC AGCGTTTTTG TTTGGCCCTA TTGAGCCCGA AGGCACCGCA GCACGCCCAT ACTCCTATGT CGACCATCTA CGCGTGCTCG ATGAAGGGGC AAGTCTTGAG CATCCATTGC AGCTCTATCG CACACTGGGT CATATCGAAG AGGTGCTGCT TTCGCGCCAA TACGAATTCA TCAATCTCAG CGTGGGCCCC GACGTCGCCA TCGAAGATAA CGACGTGCAC GCCTGGACAT CGGTGATTGA TGACCTGCTC AGTGATGGCA ATACGTTCAT GACCATCGCG GCGGGGAACA ATGGAACACG GGACTCCATC GTTCAGCTGG ATCGTGTACA GGTACCTTCT GACTGCGTAA ACGCAATCAC CGTGGGTGCA GCAAACTGCA CCAGCGCCGC TTGGGCGCGC GCGCCTTACA GCGCTCGGGG CCCAGGTCGA AGCCCAGGCG TTATCAAGCC TGACCTCATG GCGTTCGGCG GCGGCAAACA GTACTTCCAC GCGCTGGCTC CTGGTTCCAA ACCCTCACTG ACACCGCTGC TAGGCACCAG TTTTGCTGCG CCCTACATCC TGCGCAGTGC GGTGGGTGTT CGTGCCGTAC TAGGGCAAGA GCTGTCTGCA CTGGCTATTA AAGCCTTGCT GGTGCATTCC GCCCAAATGA ATGGGCATGA ACCCATCAAT GTGGGTTGGG GCAAGGTTCC AGAAGACTTG ATGGAAGTCA TTACTTGCCC ACCAGGCGTT GCGCGAATCG TTTACCAAGG CGAGTTGAGA CCCGGCAAAT ACATCTGCGC CCCCATTCCA CTTCCCGATG ATGCTCTGAA AGGTATGGTG ACCTTGAAGG CCACTTTTTC CTTCGCCAGC AGCACTGACC CCCAAGACTC CGCGTCCTAC ACTCGAGCAG GCTTGGAGGT GACTTTCAGG CCCAATAAAG ACAAGGTTAA AGAGGGTAAA ACCAGCGCCT CTACCAAGTC GTTTTTCGAG AAGAAGAAAT TTGCCACCGA GGAAGAGCGA CGCTCTGACT CCGGCAAATG GGAGACGGTT TTACATGACT CCAAGAGAAT GCGCGGCTCG ACGCTCAACA ACGCGACATT CGATATTCAT TACAACGCGC GCGAAAAGGG TGGCAATGCC GGTAAAGCCG AGAAGATCAA ATATGCGCTG ATCATCACTG TGGAAGCGCC TAAGCACCCG GATCTCTATA CGGACATTCT GAAGGCGTAT GCCGATACCT TGGTGCCGAT TGAACCACAG GTTTCGCTGC CTATCCGGGT ATAA
|
Protein sequence | MSQTNFLIGR GELLTRDIKG PKRKMDKAIA YTLRRARERL TGQAQVASVS LNELPPIACP HDFGVARLVL NPSYIARSYF PTDLLRATGL ESIGSRRIRV TPESWTRTIE PHECATTEIF VAGKRSAFRA LSHWMDEVEE ESDEADDLTH IENIFAFEPN ERIVDPGTAN DKYYEFGIHL LPDQDSSFIQ QAFIDFAAKF ELIVHSELSF EVGNLWFVPV EGEQSHALQL AQFVFVRVIR PVPKMRGLLP STRRSGPSVS CTLPTQAPLS ADPRVAILDA GLPADHTIGK WLRNYRVLDE HAGDDPLGPE HGLAATSAFL FGPIEPEGTA ARPYSYVDHL RVLDEGASLE HPLQLYRTLG HIEEVLLSRQ YEFINLSVGP DVAIEDNDVH AWTSVIDDLL SDGNTFMTIA AGNNGTRDSI VQLDRVQVPS DCVNAITVGA ANCTSAAWAR APYSARGPGR SPGVIKPDLM AFGGGKQYFH ALAPGSKPSL TPLLGTSFAA PYILRSAVGV RAVLGQELSA LAIKALLVHS AQMNGHEPIN VGWGKVPEDL MEVITCPPGV ARIVYQGELR PGKYICAPIP LPDDALKGMV TLKATFSFAS STDPQDSASY TRAGLEVTFR PNKDKVKEGK TSASTKSFFE KKKFATEEER RSDSGKWETV LHDSKRMRGS TLNNATFDIH YNAREKGGNA GKAEKIKYAL IITVEAPKHP DLYTDILKAY ADTLVPIEPQ VSLPIRV
|
| |