| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5659 |
|---|
| Symbol | |
|---|
| ID | 3717453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 6340018 |
|---|
| End bp | 6340686 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter-like |
|---|
| Protein accession | YP_351386 |
|---|
| Protein GI | 77461879 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.878914 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0991539 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGCT GCCACAACCT GAGCTGGGGA ATACCCGGCC AACCGCTCAC TGCACCGCTC
AGCCTAAGGC TGGAAAGCGG CAGCATGACG GCAATCATCG GCATCAACGG CAGTGGCAAA
AGCAGCCTGC TCAAAGTCAT CGCAGGTTTA CAGCGACCGT TGGCCGGCAA GGTCGAGTTG
GGTGTCCCAC GCCAAAGCGG TTTGTCCTTC CTGCCTCAGC AACAGCATCT GGATCGACAG
TTCCCGATCA GTCTTCAAGA GTTGGTGGCA GCCGGTTTCT GGGGACGCCG ACTGTCGTCG
CAACTGAGAG CCCAACGTCT CGAATCCGCA CTGGAAGACT GGCACCTGAG CGGACTGGAA
CATCGTCCCC TGATGGCCCT CTCCGGCGGG GAACTGCAAC GCGCCCTACT CGCCCGATTG
AGTCTGGCCG ACACACCGTT GCTGCTGCTC GACGAACCCC ACGCCGCGCT CGACGAACTG
GGTCAGACAT TGTTGTGGCA ACACCTGCAC GCCTGGCATG AACAAGGACG AACCCTGGTC
GTGGTTTGCC ATGACCTCGC CGCCGTGCGC CAACACATTC CACAGACCTT GCTGATCAAA
CCGAGCGGCT GCGCATACGG CAGCAGCATC AATCTCATCC AGCAAACGCC TCACACGCAG
GTAGCCTGA
|
|---|
| Protein sequence | MIRCHNLSWG IPGQPLTAPL SLRLESGSMT AIIGINGSGK SSLLKVIAGL QRPLAGKVEL
GVPRQSGLSF LPQQQHLDRQ FPISLQELVA AGFWGRRLSS QLRAQRLESA LEDWHLSGLE
HRPLMALSGG ELQRALLARL SLADTPLLLL DEPHAALDEL GQTLLWQHLH AWHEQGRTLV
VVCHDLAAVR QHIPQTLLIK PSGCAYGSSI NLIQQTPHTQ VA
|
|---|
| |