| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5642 |
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| Symbol | |
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| ID | 3717436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 6321608 |
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| End bp | 6322474 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_351369 |
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| Protein GI | 77461862 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.118263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATCTGC TGCAACACAT CGCCCAGTCA CGTCACCTGT TACGCAAGTC GGAGCTCAAG
GTCGCCGACC ACGTGCTGCT TGACCCTGCG GCGGTGATGC ACAGTTCCAT GGCCGACCTG
GCCCACAGCG TCGGCATCAG CGAGCCGACC ATCGTGCGCT TCTGCCGGGC CATTGGTTGC
TCCGGTTTCC AGGATCTGAA ACTCAAGCTC GCGCAAAGCC TCGCGGCCGG CGCCAGCTTC
GGTCAGTTCG CGATCCATGA AGACGATTCC GTCGCCGACT ACAGCCTGAA AATCTTCGAC
ACCACCTTGC ACACGCTGAT GGAGGTTCGC GAAAAGCTCG ATCCTCTGGA GCTGCAACGG
GCGGTGACGC TGATGTCCCA GGCCCAGCGC GTCGAGTTCT ATGGTTTTGG TGCGTCGGGC
GCGGTGGCGG CGGATGCGCA GCACAAGTTC TTCCGTCTGC TGCTGACGGC AGCGGCGTAT
TCCGACCCGC ACATGCAGGC GATGTCGGCG GTGACGCTGA AGCCCACCGA CGTGGCGATC
TGCATTTCCC AGTCCGGCCG CTCCAAAGAC CTGCTGATCA CCGCCAACCT CGTTCGCGAG
AGCGGGGCGT CGCTGATTAC CTTGTGCCCG AGCCAGACGC CGCTGGCCGA GCTGTCGACC
GTCAACCTGG CGATCGACGT TCACGAAGAC ACCGAAATCT ACACCCCGTT GACTTCGCGT
ATCGCTCACC TGGTGGTGAT CGACGTATTG GCGATGGGCG TGGCCATGGC GCGCGGGCCG
AGCCTGGTCA ACCACCTCAA GAGCGTCAAG CGCAGCCTGC GCAGCTTGCG GCTGTCGCCA
AAATCGGTAA AAGCGCTGGA CGACTGA
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| Protein sequence | MNLLQHIAQS RHLLRKSELK VADHVLLDPA AVMHSSMADL AHSVGISEPT IVRFCRAIGC
SGFQDLKLKL AQSLAAGASF GQFAIHEDDS VADYSLKIFD TTLHTLMEVR EKLDPLELQR
AVTLMSQAQR VEFYGFGASG AVAADAQHKF FRLLLTAAAY SDPHMQAMSA VTLKPTDVAI
CISQSGRSKD LLITANLVRE SGASLITLCP SQTPLAELST VNLAIDVHED TEIYTPLTSR
IAHLVVIDVL AMGVAMARGP SLVNHLKSVK RSLRSLRLSP KSVKALDD
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