Gene Pfl01_5606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5606 
Symbol 
ID3717682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6277952 
End bp6278641 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content65% 
IMG OID 
Producttwo component transcriptional regulator 
Protein accessionYP_351334 
Protein GI77461827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGCA GGAGCATTCT GATCGTCGAC GACGAAGCGC CCATTCGCGA AATGATCGCC 
GTTGCGTTGG AAATGGCCGG CTATGACTGC CTCGAGGCAG AGAACTCGCA GCAGGCCCAC
GCCATCATCG TCGACCGCAA GCCGGACCTG ATCCTGCTCG ACTGGATGCT GCCCGGCACC
TCCGGCATCG AGCTGGCCCG CCGCCTCAAG CGTGACGAAC TGACCGGGGA CATCCCGATC
ATCATGCTCA CCGCCAAGGG CGAAGAGGAC AACAAGATCC AGGGCCTGGA AGTCGGCGCC
GACGACTACA TCACCAAACC GTTTTCCCCC CGCGAACTGG TGGCACGCCT CAAGGCCGTG
CTGCGTCGCG CCGGCCCGAC CGATGGCGAA GCGCCGATCG AAGTCGGCGG CCTGCTGCTC
GACCCGATCA GCCACCGCGT GACCATCGAC GGCCGTCCGG CCGAGATGGG CCCGACCGAA
TACCGTCTGC TGCAATTCTT CATGACCCAC CAGGAGCGCG CCTACACCCG TGGCCAGTTG
CTGGACCAGG TCTGGGGCGG CAACGTCTAT GTTGAAGAGC GCACCGTCGA CGTGCACATC
CGGCGCCTGC GCAAGGCCCT CGGCGACGCC TACGAAAATC TGGTACAAAC CGTGCGCGGC
ACCGGCTACC GGTTCTCCAC CAAGGCCTGA
 
Protein sequence
MVGRSILIVD DEAPIREMIA VALEMAGYDC LEAENSQQAH AIIVDRKPDL ILLDWMLPGT 
SGIELARRLK RDELTGDIPI IMLTAKGEED NKIQGLEVGA DDYITKPFSP RELVARLKAV
LRRAGPTDGE APIEVGGLLL DPISHRVTID GRPAEMGPTE YRLLQFFMTH QERAYTRGQL
LDQVWGGNVY VEERTVDVHI RRLRKALGDA YENLVQTVRG TGYRFSTKA