| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5570 |
|---|
| Symbol | |
|---|
| ID | 3713486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 6236555 |
|---|
| End bp | 6239005 |
|---|
| Gene Length | 2451 bp |
|---|
| Protein Length | 816 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_351298 |
|---|
| Protein GI | 77461791 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.315496 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC CTTTGATGTA CCTGCTGGCC GGCAACGGCA GCGCCGCCGA TTGGTGGGAT
GACGCGCTGC CGCATTTTCA GCGTTACGAC GTGGTGCCGC TGGAGCTGCC GGGCTTCGGC
GCCAACCCGC AGCCGCCCTG CGAGGATCTG GCGGATTACG CCCAGACCTT GTTGGCGATG
ACGCAAAAGG GCAGCGCGAT CATGGCCGTC GGGGTCAACG CGTTGCTGGT GCTGCATGCG
CTGCAACGTC GGCCCGGGCA CTTTTCTCGC AGTGTGTTGC TGGCGCCGGT GGGCGCCTTT
GTGTGGCAGC GCCGATTGCC GGCGTTGATG TCACCGCTGC CGATCCGCAA GTCCATTCAC
TGGCTGCTGT CGAACAAACC CACGCTGTTC GCCCGCAAGT TCTCCAACCA GACCTGGACA
CCCGCGCAGT ACCAGCGCAT GGGCGCCGGT TATGCGCGTT GCCGTGCGTT TGTGCCGCAC
TGGGATCTGA TCCGTGCCGA CACCGCGCTG CCATTGCTGG AGTGGATCAC CGACCCGGTC
CAACTGGTCT GGGGTGATCA GGACAAGGTG CTCGGCATCG AGCAAGCCGC CGCGTGGTCA
GCGATTCTTG CGCGTGCAGA TCTGACCATC AGCCTTCAAC CCGGTTGGGG CCATTACCCG
TGGATCGACG CGCCCGCGCA GTTTGCGCAG TGGCTGGAGT CAGGCGAACG CGGGTTTGTC
GCGCACACCA AGGGCGGGCG TTTGCGTCTG GCGGAACTGG CCCGGCAACC GGTGCCGGCG
GCGCTGACCC TCAATGATTG CAACGACCCG CGACTACCGA CCTTCCTCGC CCGCCAACCA
CAGACGATCT GGGCGGTGCG CTCCTCCAGT TATGGCGAAG ATCAGGCCGA CTCGGCGAAT
GCCGGTTTGA GCACGACCTA CCTGCGCGAG CCGGCCGCCA ACGTGCCGGC ACGTATCGCC
GAGCTGACAA CCGAAGGTGT CGAGGAAGTG GTGGTGCAGC GCTTCATCAC GCCGCAGGTG
TCGGGCATCG CGTTTGTGCG TCATCTGTCG GTGGAACTCG AATGGGTTGA AGGTCATCTT
GAGTCCCTTG CCGATGGTCA GATCAGCCCG GAACGAGCGA CGCTTTCGCG GCTCGGCGAT
GCCTGGCGCA CCGGCACGTT CACGACCGCC CACGGTTTGA CCGAAGACGT GCTGTGGCGC
TTTCTCCAGG ATGTCTTGCG GGTGTTTCAC TATGTGCCCG GCGATGTCGA ATGGGCCTGG
GACGGTTCGC AACTGTGGCT GCTGCAATAT CGGCCGATCA GCGACTACGG CTGGCGCCGG
CACCTGACGG CCGCCAACAT CGCCGAGATC TTGCCGCCGC AACCCAGTGT GCTGGTGGAG
TACGCCCAGC GCCGGGCCGC CGCGAGTATT CCGGCGATCA TGGCCCGTTG GGATGCGCGG
GTGTTGCAGG ACAACGAGCC GTTCACGGCG GTATTTGGCG GCGCGTCCTA CATCAACAAC
GACCTGTTTC TCGCACGCTT GGCCGACTGG GGCATCAGCG CCAGCAACTA TGCAGGTGAA
GTCGGCGGCG CGACTCCGCA TCTGCCGTGG CGACCGCTGC GGATGTTGCG TTCGCTGCCA
TTGTTTCTGC GCATGCAGCG TATCGCTCGC GGGCATTTGC TGAGCCTTGA GCACGGCTTG
CAGCGCTTCG ACCGGGAGCT GACGGACCTC GTCGCCCAGG GTGCGGACGG GCAACAACTC
GCCGACTGGT TTACCCGGTT CTATGTGTTC GTGGTACAGG GCAATCTGTG CATCGCCACG
GCGCTGGCCA GCAGCGGCGG GGACTGGCTT GGCCGACCAC CCACCGCTTA CGACAACCTG
GAAAACAGCC CCCATCGACT GCCATGGGAG ACCGATCCGG CCACACCTCG ACCCGTATCG
AGCGCGTTGC CATTACAGGC CTTCCCGCAA TGGTCAGGGC TGATTCGCCT CGCGCATTCG
ACCGGCCTGC CGGGCCTGCG TGGTTACTAC CTGCAAGTGC GCGAGTGGTA TCGCGACAAC
CTGATGCGCA TCTTCTTCCG CCTGCATCAC GCCATGCCGC TGGCGGATCG CGAACACTGG
TTTGCGCCGC ACCCGGACAT CCGCACGCGC GACGGCAGCT TCTGGCAGGA CGGCCGCGAA
GGTGCCGAAC AGGCCACCGG ATTCATGATT TACCCGGGGC AGGTGAGGGG CATTCTTGGC
GAAGACATCT TGCTGGAAGA CACCCTCGAT CCCGGGCGCC ACGCGCACTA TCAGGCCGCG
CGGGCGGTGA TTGCGCGGAT GGGCGGGCGG TTGTCGCATG GTTCGACGTT GTTGCGGGAA
CTGCGCAAGC CTTCGGCGGT GATGCCGCAG GTGGATCTGG CGTGGATCGG GTGCGAAGTG
TTGTATCGGG ATGGTGAATT GGAATTGATG AATTCGAAGG ATGTGAAGTG A
|
|---|
| Protein sequence | MSKPLMYLLA GNGSAADWWD DALPHFQRYD VVPLELPGFG ANPQPPCEDL ADYAQTLLAM
TQKGSAIMAV GVNALLVLHA LQRRPGHFSR SVLLAPVGAF VWQRRLPALM SPLPIRKSIH
WLLSNKPTLF ARKFSNQTWT PAQYQRMGAG YARCRAFVPH WDLIRADTAL PLLEWITDPV
QLVWGDQDKV LGIEQAAAWS AILARADLTI SLQPGWGHYP WIDAPAQFAQ WLESGERGFV
AHTKGGRLRL AELARQPVPA ALTLNDCNDP RLPTFLARQP QTIWAVRSSS YGEDQADSAN
AGLSTTYLRE PAANVPARIA ELTTEGVEEV VVQRFITPQV SGIAFVRHLS VELEWVEGHL
ESLADGQISP ERATLSRLGD AWRTGTFTTA HGLTEDVLWR FLQDVLRVFH YVPGDVEWAW
DGSQLWLLQY RPISDYGWRR HLTAANIAEI LPPQPSVLVE YAQRRAAASI PAIMARWDAR
VLQDNEPFTA VFGGASYINN DLFLARLADW GISASNYAGE VGGATPHLPW RPLRMLRSLP
LFLRMQRIAR GHLLSLEHGL QRFDRELTDL VAQGADGQQL ADWFTRFYVF VVQGNLCIAT
ALASSGGDWL GRPPTAYDNL ENSPHRLPWE TDPATPRPVS SALPLQAFPQ WSGLIRLAHS
TGLPGLRGYY LQVREWYRDN LMRIFFRLHH AMPLADREHW FAPHPDIRTR DGSFWQDGRE
GAEQATGFMI YPGQVRGILG EDILLEDTLD PGRHAHYQAA RAVIARMGGR LSHGSTLLRE
LRKPSAVMPQ VDLAWIGCEV LYRDGELELM NSKDVK
|
|---|
| |