Gene Pfl01_5563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5563 
Symbol 
ID3713479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6231202 
End bp6232245 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351291 
Protein GI77461784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.727152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCGT CACTCACGTC GTGCAGGGAC GTTGGCAGCG ACTGCGCGCT GGCGCTGAAG 
GACAATTTTC TGGTGGACGC ACATTCCGGG CAGCGTCTAT CCGAGACGGC GGAGCCGGCA
GGGGCGATGA GTGACTTCTG GCTGTATCGA GATGGCGAGC GCTACATCCT TCAGGAAGAA
AACTACTCCC AGGCGAAGTC GCGTCGTTGG CTGGTTTTTA CTTACGACAG CGGCAAAGTT
GTGCTCGACG GCGCTTATGT TTTCTCGATC GACATTGATA TGAACACCGG GCCCTACTGG
CATGGCTACG ACTGCCGAGG TGATGCCAAG CCGTTCGCCG TGCCAACGAA AGACTCGTTC
AGTGAAGTCG CTTTGGAGGC GTTATGCGGG GAGGCCGAAG GCTGGGTCGT CTCGGGCGGG
GATACCAAGG TGCCGGTGTC GGCCAAAGGG CTGGCCGTCA GTGTTCCCGT TTATCACGAC
CGCAATCGTG AGGGTTCAGC GACGTACCTG TTTACTGAAA GCGATGTTCC GGATCTTTCG
AAACTGGTTT GCCTGTCCAA CTGTGCTGAT GTCGCGCAAA CGCCGGAGCG CGTTTCGCAG
GAGACGGCGC CGTTGAAGCG CGGGCAGGAT GGAACGTTGT GCTCGGATGA TGAAGACATC
TACTTCAGTT GCCCATTGCG GGGCGGTAAG ACGGTTTCTG TTTGTGCGAC GGGAAACAGC
AAGCCCACGG CCGGTTCTGT TCAGTATCGC TACGGTGTGC CGGGGAATAT CGAGATGGTC
TACCCGAAAA ATGCTATGCC ACCCAAGGGC AAATTTTTTG TTGTAGATGC GTCGGAAGGC
AGCGTGAACC TGAACATCAT CAAGTTCAAA AGCGGTGCGT ATACCTACCT CGTTAACCAG
GCCTTCGTGA GTTATCTGAA GGTGCTCAAG GGGGACAAAG TTGTATTCCG ACAGTCTTGT
AATGCCGGTG GTCATGCTTA CGTACACCGG TTGGCGGATT TCGGACTAGA GAAGGCCCCA
AAAAGCGCAG AGGACTTTCG CTAG
 
Protein sequence
MFPSLTSCRD VGSDCALALK DNFLVDAHSG QRLSETAEPA GAMSDFWLYR DGERYILQEE 
NYSQAKSRRW LVFTYDSGKV VLDGAYVFSI DIDMNTGPYW HGYDCRGDAK PFAVPTKDSF
SEVALEALCG EAEGWVVSGG DTKVPVSAKG LAVSVPVYHD RNREGSATYL FTESDVPDLS
KLVCLSNCAD VAQTPERVSQ ETAPLKRGQD GTLCSDDEDI YFSCPLRGGK TVSVCATGNS
KPTAGSVQYR YGVPGNIEMV YPKNAMPPKG KFFVVDASEG SVNLNIIKFK SGAYTYLVNQ
AFVSYLKVLK GDKVVFRQSC NAGGHAYVHR LADFGLEKAP KSAEDFR