| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5518 |
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| Symbol | |
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| ID | 3713784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 6185626 |
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| End bp | 6187296 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_351246 |
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| Protein GI | 77461739 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.486048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTACGC CTGTCGAACC CTTGCGTTTG CTGCTACTGG CCGAAGAGCC AGCGTGGACA
GCGTTATTGC GCGAGTGTCT GGCTCCGTTG GGGAGTGCGG CGGTGCTGAT CAGCGCGCCG
AGCTGGGAGT CGGTCAGCAG TCTGTTCGAA GAAAACCGCC ATGCGGTGTT GTTGACCGTT
CCCGCCTTGC AGCCGGCGCC CGGCCGTTGC AGCCTGCCGA CAGTGTTGCT GCTGGAGCAC
GAACCGGCAA CCGCGCCCGA CGGCGTCAGC GACTGGCTGG TGTTCGATGC CCTCGATACC
GACATGCTCC GGCGTTGCCT GCGGCATGTG CGCGAACGCG GCGTGCTGGA AAACACCCTG
CAACGCCTGG CCGAGCAGGA TCCGCTGACC GGCATCGCCA ATCGTCAGGG CTTCCAGACC
CTGCTCACGG CCCGTCTGGC GGAAAACGAC GGCCGCGGCC TGGCCCTCGG GCACCTCGAT
CTCGACAACT TCCGCCACGC CAACGACGCT CTCGGCCACC AGGCCGGCGA CCGCCTGATC
CTGCAAGTCG TCGCACGGCT GAAAAGTCAG CTGGAAATCG GCGATCAACT GGCGCGCCTC
GGCAGCGACG AATTCGCCCT GCTGATCGAC ACTCGCCGCG CCCCGCAACG GGCAGAATGG
ATGGCCGAAC GCATCACCGA AGCGCTGGCT GAACCTTACT GGGTCGATGG CGAAAGCCTG
CTGATCGGCT CCAGCCTCGG CATCGCCCAT GCGCGGGCCC AGGGCGGCGC CGATCCGTTG
ATGTGGCACG CGCACATCGC CATGCAGCAG GCCAAGAGCA CTCAGGGCTG CACTTTTCAC
ATCTTCAACG AGCGGATCAA CCGCAACGCG CGGAGCATGG CCGACCTCGA AAGCGAGCTG
CGCCGGGCTT TGCGTCGCGA TGAATTGGAG CTGCATTACC AGCCGCGCCT GAACCTGCAG
GACGGCCAGA TCGTCGGCCT CGAAGCGCTG GTGCGCTGGC GTCACAGTGA GCGCGGCCTG
CTGCCGCCGA GTGAATTCGT GCCGCTGGCC GAGCAGAGCG GTCTGATCGT GCCGCTGGGT
TACTGGGTGA TTTCCCGGGC CCTGCGCGAC ATGCAGGCGT TGCGCGAGCG CGGACTGCCG
GCGCTGCACA TGGCGATCAA CCTGTCGTTT CGCCAGTTTC AGGACAGTCA GTTGCTGCCG
ACGCTCAGTC GTCTGATCGC CGAGCGCGGC GTCGAGGCGC AGTGGCTGGA ATTCGAACTC
ACCGAAACCG CCGTGATGCG CCGCAGCGAT CTGGTCAAGC AGACCATGGA CGCCCTCGGT
CGCCTCGGCG TGCGTTTTTC GCTGGATGAT TTCGGCACCG GGTTCTCATC GTTCGTGCAC
CTCAACAGCC TGCCGATCAC CTTGCTGAAG ATCGACAAGA GCTTCGTCGG CGGCATGGAG
CAGCGCGAAG AGAACCGCAA ACTGGTGCAC GCGATGATCA ATCTTGCGCA CAACCTGCAC
CTGGAAGTGG TGGCCGAAGG GGTGGAAACC CGGGAGCAAC TGGATCTGTT GCGCGGGTTC
GGCTGCGATC AGGTGCAGGG TTACCTGATC AGCAAGCCGC TGCCGTTGGC GGAACTGGTT
GAATATCTGG TGGTTGACGC CAGCCAGCCG CCGCTGGGTA TCGTGGTTTA G
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| Protein sequence | MTTPVEPLRL LLLAEEPAWT ALLRECLAPL GSAAVLISAP SWESVSSLFE ENRHAVLLTV
PALQPAPGRC SLPTVLLLEH EPATAPDGVS DWLVFDALDT DMLRRCLRHV RERGVLENTL
QRLAEQDPLT GIANRQGFQT LLTARLAEND GRGLALGHLD LDNFRHANDA LGHQAGDRLI
LQVVARLKSQ LEIGDQLARL GSDEFALLID TRRAPQRAEW MAERITEALA EPYWVDGESL
LIGSSLGIAH ARAQGGADPL MWHAHIAMQQ AKSTQGCTFH IFNERINRNA RSMADLESEL
RRALRRDELE LHYQPRLNLQ DGQIVGLEAL VRWRHSERGL LPPSEFVPLA EQSGLIVPLG
YWVISRALRD MQALRERGLP ALHMAINLSF RQFQDSQLLP TLSRLIAERG VEAQWLEFEL
TETAVMRRSD LVKQTMDALG RLGVRFSLDD FGTGFSSFVH LNSLPITLLK IDKSFVGGME
QREENRKLVH AMINLAHNLH LEVVAEGVET REQLDLLRGF GCDQVQGYLI SKPLPLAELV
EYLVVDASQP PLGIVV
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