| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5489 |
|---|
| Symbol | |
|---|
| ID | 3713813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 6156949 |
|---|
| End bp | 6158343 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_351217 |
|---|
| Protein GI | 77461710 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTG ACAAGACCAA TCAGTCCTGG GGCGGCCGCT TCAGTGAACC CGTCGACGCC
TTCGTCGCCC GCTTCACCGC CTCCGTCACT TTCGACCAGC GCCTGTATCG CCACGACATC
ATGGGCTCGA TCGCCCACGC CACCATGCTG GCCAAGGTCG GCGTGCTGAC GGATGCCGAG
CGCGACAGCA TCATCGATGG CCTGAAGACC ATCCAGGGCG AAATCGAGGC CGGCCAGTTT
GACTGGCGCG TCGACCTCGA AGACGTGCAC ATGAACATCG AAGCACGCCT GACCGACCGC
ATCGGCGTCA CCGGCAAGAA GCTGCACACC GGCCGTAGCC GCAACGACCA GGTCGCCACC
GACATCCGCC TGTGGCTGCG TGACGAAATC GACCTGATCC TGAGCGAAAT CACCCGCCTG
CAAAAAGGCC TGCTGGAGCA GGCCGAGCGT GAAGCCGCCA GCATCATGCC GGGCTTTACT
CACCTGCAGA CCGCTCAGCC GGTGACCTTC GGGCACCACA TGCTGGCCTG GTTCGAAATG
CTCAGCCGCG ACTACGAGCG TCTGGTCGAC TGCCGCAAGC GCACCAACCG CATGCCGCTG
GGCAGCGCCG CACTGGCCGG CACCACTTAC CCGATCGACC GCGAATACAC CGCACAACTG
CTGGGCTTCG ACGCCGTCGG CGGCAACTCG CTGGACAACG TGTCCGACCG TGACTTCGCC
ATCGAATTCT GCTCGGCCGC GAGCATCGCG ATGATGCACC TGTCGCGCTT CTCCGAAGAG
CTGGTGCTGT GGACCAGCGC GCAATTCCAG TTCATCGATC TGCCAGACCG TTTCTGCACC
GGCAGCTCGA TCATGCCGCA AAAGAAAAAC CCCGACGTGC CAGAGCTGGT ACGTGGCAAG
ACCGGCCGTG TGTTCGGCGC CCTGATGGGC CTGTTGACCC TGATGAAAGG CCAGCCACTG
GCCTACAACA AGGACAATCA GGAAGACAAG GAACCGTTGT TCGACGCCGC CGATACCCTG
CGCGACTCGC TGCGGGCTTT TGCCGACATG ATCCCGGCGA TCAAGCCAAA GCACGCGATC
ATGCGTGAAG CGGCACTGCG CGGTTTCTCC ACCGCCACCG ACCTGGCCGA CTACCTGGTA
CGCCGTGGCC TGCCGTTCCG TGATTGCCAC GAGATCGTCG GTCATGCCGT GAAGTACGGC
GTCGACACCG GCAAGGATCT GGCGGAAATG AGCCTGGAAG AACTGCGTCA GTTCAGCGAC
CAGATCGAGC AGGACGTGTT TGCAGTGCTG ACCCTGGAAG GTTCGGTAAA TGCCCGTGAC
CACATCGGCG GCACTGCGCC GGCGCAGGTC AAGGCTGCCG TGGTTCGTGG TCAGGCGTTG
ATCGCCAGCC GCTAA
|
|---|
| Protein sequence | MSTDKTNQSW GGRFSEPVDA FVARFTASVT FDQRLYRHDI MGSIAHATML AKVGVLTDAE
RDSIIDGLKT IQGEIEAGQF DWRVDLEDVH MNIEARLTDR IGVTGKKLHT GRSRNDQVAT
DIRLWLRDEI DLILSEITRL QKGLLEQAER EAASIMPGFT HLQTAQPVTF GHHMLAWFEM
LSRDYERLVD CRKRTNRMPL GSAALAGTTY PIDREYTAQL LGFDAVGGNS LDNVSDRDFA
IEFCSAASIA MMHLSRFSEE LVLWTSAQFQ FIDLPDRFCT GSSIMPQKKN PDVPELVRGK
TGRVFGALMG LLTLMKGQPL AYNKDNQEDK EPLFDAADTL RDSLRAFADM IPAIKPKHAI
MREAALRGFS TATDLADYLV RRGLPFRDCH EIVGHAVKYG VDTGKDLAEM SLEELRQFSD
QIEQDVFAVL TLEGSVNARD HIGGTAPAQV KAAVVRGQAL IASR
|
|---|
| |