Gene Pfl01_5462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5462 
Symbol 
ID3714078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6128241 
End bp6128978 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_351190 
Protein GI77461683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0220476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTGC TTAGAATTTC CGCCCTGCAT AAATATTACG GCGATCACCA CGTGCTCAAA 
GGCATCGACC TGAGCGTCGA GGAAGGCCAA GTGGTGGCGA TCATCGGCCG CAGCGGCTCG
GGCAAGTCCA CCCTGCTGCG CACCCTCAAC GGTCTGGAAT CGATCAACGA CGGCGTGATC
GAAGTCGACG GCGAATACCT GGATGCCGCC CGCGCCGACC TGCGCAGCCT GCGGCAAAAG
GTCGGGATGG TGTTCCAACA GTTCAACCTG TTCCCGCACC TGACGGTGGG CGAAAACGTG
ATGCTCGCGC CGCAAGTGGT ACAGAAAGTG CCCAAGGCCA AAGCGCAGGA ACTCGCGCGG
CGGATGCTGG AACGTGTGGG TCTGGGTGAG AAGTTCGATG CCTTTCCTGA GCGTCTCTCC
GGCGGTCAGC AACAGCGCGT GGCGATTGCC CGGGCGCTGG CGATGTCGCC GAAGGTGCTG
CTGTGCGACG AGATCACCTC GGCGCTGGAT CCGGAGCTGG TCAACGAAGT GCTCAGCGTG
GTCCGCCAGC TCGCGAAGGA AGGCATGACG CTGATCATGG TCACCCACGA AATGCGCTTC
GCCCGGGAGG TCGGGGACAA ACTGGTGTTC ATGCATCAGG GCAAGGTGCA CGAGGTGGGC
GATCCGAAAG TGCTGTTTGC CGATCCGCAG ACGCCGGAAC TGGCGAATTT CATTGGCACC
GTGGAAGCGA CTGCCTGA
 
Protein sequence
MPLLRISALH KYYGDHHVLK GIDLSVEEGQ VVAIIGRSGS GKSTLLRTLN GLESINDGVI 
EVDGEYLDAA RADLRSLRQK VGMVFQQFNL FPHLTVGENV MLAPQVVQKV PKAKAQELAR
RMLERVGLGE KFDAFPERLS GGQQQRVAIA RALAMSPKVL LCDEITSALD PELVNEVLSV
VRQLAKEGMT LIMVTHEMRF AREVGDKLVF MHQGKVHEVG DPKVLFADPQ TPELANFIGT
VEATA