Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5462 |
Symbol | |
ID | 3714078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6128241 |
End bp | 6128978 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_351190 |
Protein GI | 77461683 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0220476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCTGC TTAGAATTTC CGCCCTGCAT AAATATTACG GCGATCACCA CGTGCTCAAA GGCATCGACC TGAGCGTCGA GGAAGGCCAA GTGGTGGCGA TCATCGGCCG CAGCGGCTCG GGCAAGTCCA CCCTGCTGCG CACCCTCAAC GGTCTGGAAT CGATCAACGA CGGCGTGATC GAAGTCGACG GCGAATACCT GGATGCCGCC CGCGCCGACC TGCGCAGCCT GCGGCAAAAG GTCGGGATGG TGTTCCAACA GTTCAACCTG TTCCCGCACC TGACGGTGGG CGAAAACGTG ATGCTCGCGC CGCAAGTGGT ACAGAAAGTG CCCAAGGCCA AAGCGCAGGA ACTCGCGCGG CGGATGCTGG AACGTGTGGG TCTGGGTGAG AAGTTCGATG CCTTTCCTGA GCGTCTCTCC GGCGGTCAGC AACAGCGCGT GGCGATTGCC CGGGCGCTGG CGATGTCGCC GAAGGTGCTG CTGTGCGACG AGATCACCTC GGCGCTGGAT CCGGAGCTGG TCAACGAAGT GCTCAGCGTG GTCCGCCAGC TCGCGAAGGA AGGCATGACG CTGATCATGG TCACCCACGA AATGCGCTTC GCCCGGGAGG TCGGGGACAA ACTGGTGTTC ATGCATCAGG GCAAGGTGCA CGAGGTGGGC GATCCGAAAG TGCTGTTTGC CGATCCGCAG ACGCCGGAAC TGGCGAATTT CATTGGCACC GTGGAAGCGA CTGCCTGA
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Protein sequence | MPLLRISALH KYYGDHHVLK GIDLSVEEGQ VVAIIGRSGS GKSTLLRTLN GLESINDGVI EVDGEYLDAA RADLRSLRQK VGMVFQQFNL FPHLTVGENV MLAPQVVQKV PKAKAQELAR RMLERVGLGE KFDAFPERLS GGQQQRVAIA RALAMSPKVL LCDEITSALD PELVNEVLSV VRQLAKEGMT LIMVTHEMRF AREVGDKLVF MHQGKVHEVG DPKVLFADPQ TPELANFIGT VEATA
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