Gene Pfl01_5363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5363 
Symbol 
ID3714834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6024185 
End bp6025570 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content66% 
IMG OID 
ProductGTP-binding protein, HSR1-like 
Protein accessionYP_351091 
Protein GI77461584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATG CCTGGAAAGC GCCGCTGAAA CTGGCGGTGG TCGGCCACAC CAACGTCGGC 
AAGACTTCGC TGCTGCGCAC CCTGACCCGC GACGTCGGAT TCGGCGAAGT CTCCCATCGC
CCGAGCACCA CGCGGCATGT CGAAGGTGCA CGGTTGTCAG TGGATGGCGA ACCGTTGCTC
GACCTCTACG ACACGCCCGG TCTGGAGGAC GCCATCGCCC TGCTGGATTT TCTCGAGCGT
CTGGAACGTC CCGGCGAACG CCTCGACGGC CCGGCACGGC TGGCGCGGTT TCTCGACGGC
AGCGAAGCGC GCCAGCGCTT CGAACAGGAA GCCAAAGTCC TGCGGCAACT GCTCGATTCC
GATGCCGGCC TGTACGTGAT TGACGCCCGC GAACCGGTGC TGGCCAAGTA CCGCGACGAA
CTGGAAGTGC TGGCCAGTTG CGGCAAGCCG CTGCTGCCGG TGCTGAATTT CGTCAGCAGC
GCCAACCATC GCGAACCGGA CTGGCGTGAA GCCCTGGCGC GCCTCGGCCT GCACGCGCTG
GTGCGTTTCG ACAGCGTCGC CCCGCCGGAG GATGGTGAGC GTCGGTTGTA TGAAAGCCTC
GCTCTGTTGC TGGAGAACGC CCGCCCACAA CTTGAACGCC TGATCGCCGA TCAACAGGCC
CAACGCCTCG CCCGCGAGCA AAGCGCCGCA CGCCTGATCG CCGAACTGCT GATCGATTGC
GCCGCGTGCC GACGCAGCGT GGCGAGCAAC GCCGAGCAGG AACAACAGGC CATCAGCGAA
TTGCGCAAAG CCGTGCGTCA GCGCGAACAA CGCTGCGTCG AGGCGCTGCT CAAGCTCTAC
GCCTTCCGCC CGCAGGACGC CGCCGCCAGC GACCTGCCGC TGCTCGACGG ACGCTGGGGC
GACGACCTGT TCAACCCGGA AACCCTCAAG CAACTCGGCG TGCGGGTCGG CGGCGGGATT
GCCGCCGGAG CCGCAGCCGG TGCGGGTGTG GATTTGCTGG TCGGTGGTAT CACCCTAGGT
GCCGCCGCCC TGGCCGGTGC CATTGCCGGC GGCGCCCTGC AAACTGCCCG CAGCTACGGC
AACCGCCTGC TCGGCAAGAT CAAAGGGCAG CGAGAGCTGA CGGTCGACGA CAACGTGTTG
CGCCTGCTGG CCCTGCGTCA GCGGCAACTG TTGCAAGCGC TGAACGCCCG AGGCCATGCG
GCGCTGGACA GCATTCAGGT GGCGACGCCG CAGGACAAGA CCTGGCGCGA AGGCAAGCTG
CCGGAGGCGC TGAACATTGC CCGGGCCCAC CCGCAATGGT CGTCGCTCAA CCCGCATCCG
AAACTGAATC AGGCCCAGCG TCAGGAACAG ATCGATGAAC TGGTCGGCAA GGTCCTCGAA
CTCTAG
 
Protein sequence
MTDAWKAPLK LAVVGHTNVG KTSLLRTLTR DVGFGEVSHR PSTTRHVEGA RLSVDGEPLL 
DLYDTPGLED AIALLDFLER LERPGERLDG PARLARFLDG SEARQRFEQE AKVLRQLLDS
DAGLYVIDAR EPVLAKYRDE LEVLASCGKP LLPVLNFVSS ANHREPDWRE ALARLGLHAL
VRFDSVAPPE DGERRLYESL ALLLENARPQ LERLIADQQA QRLAREQSAA RLIAELLIDC
AACRRSVASN AEQEQQAISE LRKAVRQREQ RCVEALLKLY AFRPQDAAAS DLPLLDGRWG
DDLFNPETLK QLGVRVGGGI AAGAAAGAGV DLLVGGITLG AAALAGAIAG GALQTARSYG
NRLLGKIKGQ RELTVDDNVL RLLALRQRQL LQALNARGHA ALDSIQVATP QDKTWREGKL
PEALNIARAH PQWSSLNPHP KLNQAQRQEQ IDELVGKVLE L