| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5353 |
|---|
| Symbol | |
|---|
| ID | 3714824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 6011786 |
|---|
| End bp | 6012325 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | peptidase C56, PfpI |
|---|
| Protein accession | YP_351081 |
|---|
| Protein GI | 77461574 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.500077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTT CTCTCAGCGG CAAGCGCGTC GCTTTTTTGG TAACCGATGG TTTCGAGCAG
GTTGAACTGA CTGGCCCCAA ACAGGCATTG GAGCAGGCCG GAGCGCAGGT TGACATCCTC
TCTGCCGAAG CCGGCAGCGT CAAAGGCTGG AATCACGATA AACCGGCGGA CGACTTCAAG
GTCGACCAGA CCTTCCAAGG CGCAAGCATC GATCAATACG ATGCCGTGGT GCTCCCGGGC
GGTGTGCAGA ACTCTGACAC CATCCGCATC GACCAGGACG CCCAGCATCT GGTCAAGACC
GGTACCTCCG CCGGCAAACC GATCGCAGTG ATCTGCCATG GCAGCTGGCT GCTGATTTCG
GCAGGGCTGG TCAATGGCAA GACCATGACC AGCTACAAGA CCGTCAAGGA CGATCTGGTC
AACGCGGGGG CGAACTGGGT TGATCAGGAA GTCGTAAAAG ACGGACACCT GATCAGCAGC
CGCCAACCAG ACGATATTCC GGCGTTCAGC AATGCGCTGA TCGACGCGTT GTCGGCATAG
|
|---|
| Protein sequence | MATSLSGKRV AFLVTDGFEQ VELTGPKQAL EQAGAQVDIL SAEAGSVKGW NHDKPADDFK
VDQTFQGASI DQYDAVVLPG GVQNSDTIRI DQDAQHLVKT GTSAGKPIAV ICHGSWLLIS
AGLVNGKTMT SYKTVKDDLV NAGANWVDQE VVKDGHLISS RQPDDIPAFS NALIDALSA
|
|---|
| |