| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5244 |
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| Symbol | |
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| ID | 3716195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5901967 |
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| End bp | 5903670 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | choline dehydrogenase |
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| Protein accession | YP_350972 |
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| Protein GI | 77461465 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.80037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0658003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAG AATTCGATTA CATCATCGTC GGTGCCGGCT CTGCCGGTAA CACCCTGGCG
ACCCGTCTGA CTGAAGACGA AGGCGTCACC GTCCTGCTGC TTGAAGCCGG CGGCCCGGAC
TATCGTTTCG ACTTCCGTAC GCAAATGCCG GCCGCTCTGG CATTCCCGCT GCAAGGTCGT
CGCTACAACT GGGCGTACGA AACCGATCCG GAGCCACACA TGGACGGTCG CCGGATGGAA
TGCGGTCGCG GCAAGGGCCT CGGCGGTTCC TCGCTGATCA ACGGCATGTG CTACATCCGC
GGCAACGCAA TGGACTACGA CGGCTGGGCC AAACTGCCAG GCCTGGAAGA CTGGTCCTAC
CTCGACTGCC TGCCGTATTT CCGAAAAGCG GAAACCCGCG ACATCGGCCC GAACGACTAC
CACGGTGGCG ACGGCCCGGT CAGCGTGACC ACGCCGAAAG CGGGCAACAA CCCGCTGTTC
CACGCCATGG TTGAAGCTGG CGTGCAGGCC GGTTACCCGC GCACCGAAGA CTTGAACGGC
TATCAGCAGG AAGGCTTTGG CCCGATGGAC CGCACCGTGA CGCCGAATGG CCGTCGTGCT
TCCACCGCCC GTGGTTACCT GGACGTGGCC AAGAAGCGTT CGACCCTGAC CATCGTTACT
CACGCCCTGA CCGACAAGGT TCTGTTCGAA GGCAAGCGTG CCGTTGGAGT GCGTTACCTG
GTCGGCGCCG CTGAAGAGCG CGTCGAAGCC CGCGCCCGCA AAGAAGTCAT CGTCTGCTCC
GGCGCGATCG CTTCGCCGCA ACTGCTGCAA CGCTCCGGTG TCGGCCCGGC GAAACTGCTG
GAAAGCCTCG ACATCCCAGT GGTTCACGAT CTGCCAGGCG TTGGCGAAAA CCTGCAGGAT
CACCTTGAGC TGTACCTGCA ATACGCTTGC ACCCAACCGG TCTCGCTGTA CCCGTCGCTG
CTCTGGTACA ACCAGCCGGC CATCGGTGCC GAGTGGCTGT TCAACGGCAC CGGCATTGGC
GCCAGCAACC AGTTCGAAGC CGGCGGTTTC ATCCGTACCC GTCCGGAATT CGAGTGGCCG
AACATCCAGT ATCACTTCCT GCCGGTGGCG ATTAACTACA ACGGCAGCAA CGGTGTGAAA
GAGCACGGTT TCCAGGCGCA CATGGGTTCC ATGCGTTCGC CGAGCCGCGG TCGCGTCCAG
GTCAAATCCA AGGATCCGCG CCAGCACCCG AGCATCCTGT TCAACTACAT GGCCACCGAG
CAGGACTGGC AGGAATTTCG CGACGGCATC CGCCTGACCC GTGAAATCAT GCAACAGCCT
GCACTGGACG CCTTCCGTGG CCGCGAAATC AGCCCGGGCA TCGAAGTGCA AACCGATGAG
CAGCTGGACA AGTTCATCCG CGAGCACGCC GAAACCGCGT TCCACCCGTC CTGCTCGTGC
AAGATGGGCA CCGACGACAT GGCCGTAGTG GATGGCGAAG GCCGCGTGCA TGGCATGCAG
GGTCTGCGTG TGGTCGATGC GTCGATCATG CCGATCATCA CCACCGGCAA CCTGAACGCG
CCGACGATCA TGATGGCCGA GAAAATCGCC GACAAGATCC GTGGCCGTCA GCCGCTGCCG
CGCAGCAAGG CGCCGTACTA CGTCGCTGGC GATGCGCCAG TGAAAGGCAA GGCGATGCGT
GATGTGAGCG CTGTTGCTCA GTAA
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| Protein sequence | MSQEFDYIIV GAGSAGNTLA TRLTEDEGVT VLLLEAGGPD YRFDFRTQMP AALAFPLQGR
RYNWAYETDP EPHMDGRRME CGRGKGLGGS SLINGMCYIR GNAMDYDGWA KLPGLEDWSY
LDCLPYFRKA ETRDIGPNDY HGGDGPVSVT TPKAGNNPLF HAMVEAGVQA GYPRTEDLNG
YQQEGFGPMD RTVTPNGRRA STARGYLDVA KKRSTLTIVT HALTDKVLFE GKRAVGVRYL
VGAAEERVEA RARKEVIVCS GAIASPQLLQ RSGVGPAKLL ESLDIPVVHD LPGVGENLQD
HLELYLQYAC TQPVSLYPSL LWYNQPAIGA EWLFNGTGIG ASNQFEAGGF IRTRPEFEWP
NIQYHFLPVA INYNGSNGVK EHGFQAHMGS MRSPSRGRVQ VKSKDPRQHP SILFNYMATE
QDWQEFRDGI RLTREIMQQP ALDAFRGREI SPGIEVQTDE QLDKFIREHA ETAFHPSCSC
KMGTDDMAVV DGEGRVHGMQ GLRVVDASIM PIITTGNLNA PTIMMAEKIA DKIRGRQPLP
RSKAPYYVAG DAPVKGKAMR DVSAVAQ
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