Gene Pfl01_5217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5217 
Symbol 
ID3716462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5866396 
End bp5867640 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350945 
Protein GI77461438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.276877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00292994 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGCGG TCGGTCATCT GAAACACGAA TACGACAAGG TCAAGCTGCG CCTGCACGGC 
TTGTTCACGC GCATCGAAAT GGCCTGGATG AAGCTCATCA GCGAACTCGA ACCCAAGGAA
TTCGAGGCCA TCATCAAGTT GCTCCAACGC GGTCACGATC AGGCGCAATA CGTGCTCAAG
CACGGCGAGT TGCCGACCGA CGAGCCGGCC GTGCCGTGGG AGTTGGCCCA CGGTTTGTCG
ATCCTGCGCA TCGGCAACGC GACGCCGTTG CCGCAATCGC CCGATCAATT GCAGACCAAG
GTGCTCAAGG ACGGCACGTT GCTTGGCTGC CGCAAATGGG AACTGCTGGA TCTGCTGTGG
AGCGAGGCTC TGCTCAAGTG GATCGAGAAC CTGCGCCATC ACGCGACTTT CGGCACCGAT
CCGGCGCTGG TGACCATGGA GCGCGAAGTG ACGCTGGCGA TTGCCGGCGA CTGGGGCACC
GGACCGTTCA ACAGCCATGC GCCGGCGGTG TCGGTGGCCA ACCAGATGCA ACTGGCCAAT
GCCGATTTCA CCATTCACCT GGGGGACGTC TATTACGCCG GCACTCACTC CCAGGAAGAC
ACCGACATGG CCGGCTGGCC GATGGGCACC CACGGCTCGT TCACCCTCAA TTCCAACCAC
GAGATGTACA GCGGCGCCCA CGGTTACTTC AAGGAACTGG CGGCGCGCTT TCCGGGGCAG
CAGGGCACCA GTTACTTTGC CCTGATCAAT GACGACTGGC TGATTGTCGG GCTGGATACG
GCGTACGCCT CGGACGTCAT GAACCTGTAC ATGGACGGCA CCCTGAACAA GCCGCAGATC
GAATGGATGA AGGGCCTGCC GAAGCGCAAA AAACTCATGG TGCTCAGCCA CCATCAGGGC
TTCGACATCA CCGGGCACCA CAAGACTGCG CTGTATCAAC CGGTGTGCGA TGCGCTGGGG
CGTGAGCCGG ATTATTGGTA TTGGGGCCAT TTGCACAACG GCATTGTCTA TGCGGCCCAG
GGCGGACTGC ATGCGCGTTG TGCCGGGCAC GGAGCGATTC CCTACGGCAC CACCAGCGAG
CTGAACGGGC ATTCGCGGGT GCTGTTTTCG GAGACGAAGG ATGCGAACGA TCCGGACTAC
CCGCTGCGGG TGTTGAACGG GTACGCGAAG ATCAGGTTGG TGGGGGAGGA GATTTTCGAG
GAGTTTATCG GGGAGGATGG ATCGGTGAGG TGGTCATCGA CGTGA
 
Protein sequence
MSAVGHLKHE YDKVKLRLHG LFTRIEMAWM KLISELEPKE FEAIIKLLQR GHDQAQYVLK 
HGELPTDEPA VPWELAHGLS ILRIGNATPL PQSPDQLQTK VLKDGTLLGC RKWELLDLLW
SEALLKWIEN LRHHATFGTD PALVTMEREV TLAIAGDWGT GPFNSHAPAV SVANQMQLAN
ADFTIHLGDV YYAGTHSQED TDMAGWPMGT HGSFTLNSNH EMYSGAHGYF KELAARFPGQ
QGTSYFALIN DDWLIVGLDT AYASDVMNLY MDGTLNKPQI EWMKGLPKRK KLMVLSHHQG
FDITGHHKTA LYQPVCDALG REPDYWYWGH LHNGIVYAAQ GGLHARCAGH GAIPYGTTSE
LNGHSRVLFS ETKDANDPDY PLRVLNGYAK IRLVGEEIFE EFIGEDGSVR WSST