Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5216 |
Symbol | |
ID | 3716461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5865053 |
End bp | 5866345 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | Rieske (2Fe-2S) region |
Protein accession | YP_350944 |
Protein GI | 77461437 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.168663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0108823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCG CAAAAATCAG CCTGGGCGAC CCGCTGGAAC CCGCACGCAA GGCCACCGCA CAAATGCTCC AGGAACGCGA GCGCACCTAT TCGCTGCCGC AACCGTTCTA CAGTGACGAA CGCCTGTTCG ATATCGACAT GCAGGAGATC TTCCAGAAAG AGTGGTTGAT CGCCGGCATG ACCTGCGAGA TCCCGGCCAA GGGCAACTAC ATCACCCTGC AGATCGGCAA GAACCCGATC ATCGTCATTC GCGGTGCCGA AGGCGTGGTG CACGCGTTCC ACAACGTCTG TCGTCACCGT GGCTCACGCC TGTGCACCAG CGACAAGGGC AAGGTCGCCA AACTGGTCTG CCACTACCAC CAGTGGACGT ATGAGCTGGA CGGTCGCCTG CTGTTCGCCG GCACCGAAAT GGGCGCCGAC TTCGACATGA AGCAGTACGG TCTGAAACCG GTGAACGTGA AGACCGCCGG CGGTTACATC TTCATCAGCC TGGCGGAGAA CCCGCCGGCC ATCGATGACT TCCTGTCGAC CCTGAACCAC TACATGGAAC CGTACGACAT GGAGAACACC AAGGTGGCGG TGCAAACCAC CTTGATGGAA AAGGCCAACT GGAAACTGGT GCTGGAAAAC AACCGCGAGT GCTACCACTG CAGCGGTTCT CACCCGGAAC TGTTGAAAAC CCTGCTGGAA TGGGACGACG TCACCGACCC CCGTGCCGAT CAGGCGTTCA AGGATCACGT CGCCGCCTCC GCTGCCGCGT GGGAAGCCGA AAAGATCCCT TACGCCCACG CCAGTTTCGG CCTGCGCAAC CGCATCGTGC GCATGCCGCT GCTCAAGGGC ACCGTGTCGA TGACCATGGA CGGCAAACAG GGCTGCGCCA AGCTGATGGG CCGGATCAAG AACCCGGACC TGGGCTCGAT GCGCATCCTG CACCTGCCGC ACTCGTGGAA CCACTGCATG GGCGACCACA TCATCGTGTT CACCGTGTGG CCGATCAGCG CCCAGGAAAC CATGGTCACC ACCAAGTGGC TGGTGCACAA GGATGCGGTC GAAGGCGTGG ATTACGACGT CGAACGCATG CGCCAGGTAT GGGACGCGAC CAACGATCAG GACCGTCGTC TGGCCGAAGA GAACCAGCGC GGGATCAACT CCACCGCCTA CCAGCCGGGC CCGTACTCCA AGACCTATGA GTTCGGCGTG GTCAACTTCG TCGATTGGTA CAGCGAGCGG ATGCTGAGCA ACCTCGGGGC CGAGCCTGCG CCGTATCTCA AGGGGGTTCC GGTTCAGGGT TGA
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Protein sequence | MDTAKISLGD PLEPARKATA QMLQERERTY SLPQPFYSDE RLFDIDMQEI FQKEWLIAGM TCEIPAKGNY ITLQIGKNPI IVIRGAEGVV HAFHNVCRHR GSRLCTSDKG KVAKLVCHYH QWTYELDGRL LFAGTEMGAD FDMKQYGLKP VNVKTAGGYI FISLAENPPA IDDFLSTLNH YMEPYDMENT KVAVQTTLME KANWKLVLEN NRECYHCSGS HPELLKTLLE WDDVTDPRAD QAFKDHVAAS AAAWEAEKIP YAHASFGLRN RIVRMPLLKG TVSMTMDGKQ GCAKLMGRIK NPDLGSMRIL HLPHSWNHCM GDHIIVFTVW PISAQETMVT TKWLVHKDAV EGVDYDVERM RQVWDATNDQ DRRLAEENQR GINSTAYQPG PYSKTYEFGV VNFVDWYSER MLSNLGAEPA PYLKGVPVQG
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