Gene Pfl01_5216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5216 
Symbol 
ID3716461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5865053 
End bp5866345 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content61% 
IMG OID 
ProductRieske (2Fe-2S) region 
Protein accessionYP_350944 
Protein GI77461437 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.168663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0108823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCG CAAAAATCAG CCTGGGCGAC CCGCTGGAAC CCGCACGCAA GGCCACCGCA 
CAAATGCTCC AGGAACGCGA GCGCACCTAT TCGCTGCCGC AACCGTTCTA CAGTGACGAA
CGCCTGTTCG ATATCGACAT GCAGGAGATC TTCCAGAAAG AGTGGTTGAT CGCCGGCATG
ACCTGCGAGA TCCCGGCCAA GGGCAACTAC ATCACCCTGC AGATCGGCAA GAACCCGATC
ATCGTCATTC GCGGTGCCGA AGGCGTGGTG CACGCGTTCC ACAACGTCTG TCGTCACCGT
GGCTCACGCC TGTGCACCAG CGACAAGGGC AAGGTCGCCA AACTGGTCTG CCACTACCAC
CAGTGGACGT ATGAGCTGGA CGGTCGCCTG CTGTTCGCCG GCACCGAAAT GGGCGCCGAC
TTCGACATGA AGCAGTACGG TCTGAAACCG GTGAACGTGA AGACCGCCGG CGGTTACATC
TTCATCAGCC TGGCGGAGAA CCCGCCGGCC ATCGATGACT TCCTGTCGAC CCTGAACCAC
TACATGGAAC CGTACGACAT GGAGAACACC AAGGTGGCGG TGCAAACCAC CTTGATGGAA
AAGGCCAACT GGAAACTGGT GCTGGAAAAC AACCGCGAGT GCTACCACTG CAGCGGTTCT
CACCCGGAAC TGTTGAAAAC CCTGCTGGAA TGGGACGACG TCACCGACCC CCGTGCCGAT
CAGGCGTTCA AGGATCACGT CGCCGCCTCC GCTGCCGCGT GGGAAGCCGA AAAGATCCCT
TACGCCCACG CCAGTTTCGG CCTGCGCAAC CGCATCGTGC GCATGCCGCT GCTCAAGGGC
ACCGTGTCGA TGACCATGGA CGGCAAACAG GGCTGCGCCA AGCTGATGGG CCGGATCAAG
AACCCGGACC TGGGCTCGAT GCGCATCCTG CACCTGCCGC ACTCGTGGAA CCACTGCATG
GGCGACCACA TCATCGTGTT CACCGTGTGG CCGATCAGCG CCCAGGAAAC CATGGTCACC
ACCAAGTGGC TGGTGCACAA GGATGCGGTC GAAGGCGTGG ATTACGACGT CGAACGCATG
CGCCAGGTAT GGGACGCGAC CAACGATCAG GACCGTCGTC TGGCCGAAGA GAACCAGCGC
GGGATCAACT CCACCGCCTA CCAGCCGGGC CCGTACTCCA AGACCTATGA GTTCGGCGTG
GTCAACTTCG TCGATTGGTA CAGCGAGCGG ATGCTGAGCA ACCTCGGGGC CGAGCCTGCG
CCGTATCTCA AGGGGGTTCC GGTTCAGGGT TGA
 
Protein sequence
MDTAKISLGD PLEPARKATA QMLQERERTY SLPQPFYSDE RLFDIDMQEI FQKEWLIAGM 
TCEIPAKGNY ITLQIGKNPI IVIRGAEGVV HAFHNVCRHR GSRLCTSDKG KVAKLVCHYH
QWTYELDGRL LFAGTEMGAD FDMKQYGLKP VNVKTAGGYI FISLAENPPA IDDFLSTLNH
YMEPYDMENT KVAVQTTLME KANWKLVLEN NRECYHCSGS HPELLKTLLE WDDVTDPRAD
QAFKDHVAAS AAAWEAEKIP YAHASFGLRN RIVRMPLLKG TVSMTMDGKQ GCAKLMGRIK
NPDLGSMRIL HLPHSWNHCM GDHIIVFTVW PISAQETMVT TKWLVHKDAV EGVDYDVERM
RQVWDATNDQ DRRLAEENQR GINSTAYQPG PYSKTYEFGV VNFVDWYSER MLSNLGAEPA
PYLKGVPVQG