Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5186 |
Symbol | |
ID | 3716776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5834079 |
End bp | 5834786 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | exonuclease |
Protein accession | YP_350914 |
Protein GI | 77461407 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.229542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.446377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGT TCTCGTGGCT GCGTCCGGCC AGCCCCGTTG TGCCGGACGA CCTGCAACAG CGCCTGACGA AACTGCCGGC CATCGGCGAA CTGCGCGAGT GCAGCCTGCG CGAGCAGCGC TGGGTAGTGC TGGATCTGGA AACCACCGGG CTGAACCTGA GCAAGGATCG GGTGCTGTCG ATCGGCGCGG TAGTGATCGA GGACGGTGCG ATCGACTTCA GTCAGCAGTT CGAACGCACC CTGCAATGTC ACGAGTTGAA ACTCGGCCCG AGCGTGTTGA TTCACGGCTT GGCCCCGAGC GCGATTGCCG CCGGCAGCGA GCCCACCGAA GCTTTGGTCG AGCTGCTGGA GTTTATCGGC GACAGTCCGG TGCTGGCGTT TCATGCTTCG TTCGACCAGC ACATGCTCGG CCGCGCACTG AAGGAGCACC TGGGGCACAA GTTGCAGACG GTGTTTCTCG ATGTGGCGCA GATCGCCCCG CTGGTTTGCC CGCAGGCGCA CATTCGAGAG GCGGGGCTGG ACGAGTGGAT CGACTGGTTC AAGCTCGAAG TGTTCGAGCG CCACCATGCG AGTGCCGATG CCCTGGCCAC GGCGGAACTG GCGCTGATCC TGTTCAGCCG GGCGCGCCAG CAGCAGATCC ACAGCCCGCT GAATCTGCAG CAACGCCTGA GTCAGTGGAA GCGCCGCCAG CAGACGCATT CGTTCTGA
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Protein sequence | MSLFSWLRPA SPVVPDDLQQ RLTKLPAIGE LRECSLREQR WVVLDLETTG LNLSKDRVLS IGAVVIEDGA IDFSQQFERT LQCHELKLGP SVLIHGLAPS AIAAGSEPTE ALVELLEFIG DSPVLAFHAS FDQHMLGRAL KEHLGHKLQT VFLDVAQIAP LVCPQAHIRE AGLDEWIDWF KLEVFERHHA SADALATAEL ALILFSRARQ QQIHSPLNLQ QRLSQWKRRQ QTHSF
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