Gene Pfl01_5186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5186 
Symbol 
ID3716776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5834079 
End bp5834786 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content64% 
IMG OID 
Productexonuclease 
Protein accessionYP_350914 
Protein GI77461407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.229542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.446377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGT TCTCGTGGCT GCGTCCGGCC AGCCCCGTTG TGCCGGACGA CCTGCAACAG 
CGCCTGACGA AACTGCCGGC CATCGGCGAA CTGCGCGAGT GCAGCCTGCG CGAGCAGCGC
TGGGTAGTGC TGGATCTGGA AACCACCGGG CTGAACCTGA GCAAGGATCG GGTGCTGTCG
ATCGGCGCGG TAGTGATCGA GGACGGTGCG ATCGACTTCA GTCAGCAGTT CGAACGCACC
CTGCAATGTC ACGAGTTGAA ACTCGGCCCG AGCGTGTTGA TTCACGGCTT GGCCCCGAGC
GCGATTGCCG CCGGCAGCGA GCCCACCGAA GCTTTGGTCG AGCTGCTGGA GTTTATCGGC
GACAGTCCGG TGCTGGCGTT TCATGCTTCG TTCGACCAGC ACATGCTCGG CCGCGCACTG
AAGGAGCACC TGGGGCACAA GTTGCAGACG GTGTTTCTCG ATGTGGCGCA GATCGCCCCG
CTGGTTTGCC CGCAGGCGCA CATTCGAGAG GCGGGGCTGG ACGAGTGGAT CGACTGGTTC
AAGCTCGAAG TGTTCGAGCG CCACCATGCG AGTGCCGATG CCCTGGCCAC GGCGGAACTG
GCGCTGATCC TGTTCAGCCG GGCGCGCCAG CAGCAGATCC ACAGCCCGCT GAATCTGCAG
CAACGCCTGA GTCAGTGGAA GCGCCGCCAG CAGACGCATT CGTTCTGA
 
Protein sequence
MSLFSWLRPA SPVVPDDLQQ RLTKLPAIGE LRECSLREQR WVVLDLETTG LNLSKDRVLS 
IGAVVIEDGA IDFSQQFERT LQCHELKLGP SVLIHGLAPS AIAAGSEPTE ALVELLEFIG
DSPVLAFHAS FDQHMLGRAL KEHLGHKLQT VFLDVAQIAP LVCPQAHIRE AGLDEWIDWF
KLEVFERHHA SADALATAEL ALILFSRARQ QQIHSPLNLQ QRLSQWKRRQ QTHSF